Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050039_P001 | Maize | nucleus | 61.49 | 69.83 |
| Zm00001d034984_P001 | Maize | nucleus | 56.72 | 68.59 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 60.9 | 65.38 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 60.9 | 65.38 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 60.9 | 65.38 |
| Os08t0103900-01 | Rice | nucleus | 58.81 | 60.8 |
| EES13158 | Sorghum | nucleus | 55.52 | 55.86 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 44.48 | 49.34 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 35.22 | 47.39 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 37.91 | 44.41 |
| AT1G71930.2 | Thale cress | nucleus | 42.39 | 43.83 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 40.9 | 43.77 |
| Bra016098.1-P | Field mustard | nucleus | 41.79 | 43.34 |
| Solyc11g018660.1.1 | Tomato | nucleus | 40.0 | 43.09 |
| CDX96362 | Canola | nucleus | 41.79 | 43.08 |
| CDX82202 | Canola | nucleus | 41.79 | 42.81 |
| CDX72846 | Canola | nucleus | 41.49 | 42.77 |
| Bra007996.1-P | Field mustard | nucleus | 41.49 | 42.51 |
| CDY03671 | Canola | nucleus | 41.49 | 42.51 |
| Solyc06g065410.2.1 | Tomato | nucleus | 40.6 | 42.24 |
| PGSC0003DMT400002318 | Potato | nucleus | 39.7 | 42.09 |
| PGSC0003DMT400067086 | Potato | nucleus | 40.9 | 41.64 |
| EER94595 | Sorghum | cytosol, mitochondrion, nucleus | 40.9 | 41.14 |
| KRG91808 | Soybean | nucleus | 40.9 | 40.18 |
| KRH34977 | Soybean | nucleus | 40.9 | 39.6 |
| OQU93335 | Sorghum | cytosol, mitochondrion, nucleus | 41.49 | 37.47 |
| OQU82026 | Sorghum | nucleus | 37.01 | 36.47 |
| OQU75680 | Sorghum | nucleus | 36.42 | 35.99 |
| KXG31125 | Sorghum | nucleus | 36.42 | 35.16 |
| KXG20105 | Sorghum | cytosol, nucleus, plastid | 34.93 | 32.96 |
| EES04857 | Sorghum | nucleus | 33.73 | 32.85 |
| EES12234 | Sorghum | nucleus | 33.13 | 32.27 |
| KXG24274 | Sorghum | nucleus | 35.52 | 28.4 |
| OQU76499 | Sorghum | nucleus | 23.58 | 27.62 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 34.33 | 26.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8067923 | UniProt:C5YLE5 | EnsemblPlants:EES14359 | ProteinID:EES14359 |
| ProteinID:EES14359.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | ProteinID:OQU79754.1 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF104 | EnsemblPlantsGene:SORBI_3007G003000 | SUPFAM:SSF101941 | UniParc:UPI0001A87888 | RefSeq:XP_002444864.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:-:277413..280393
Molecular Weight (calculated)
36706.8 Da
IEP (calculated)
6.921
GRAVY (calculated)
-0.564
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDHHHQQQQ APCVPPGFRF HPTEEELVGY YLARKVASQK IDLDIIREVD LYRIEPWDLQ ERCGYYGGSY GQDQEEPTEY YFFSYKDRKY PSGTRTNRAT
101: AAGFWKATGR DKPVLSSTTT SRSSAAAGGI SVVIGMRKTL VFYRGRAPNG RKTDWIIHEY RLQSNEHAPA QEEGWVVCRA FQKPMPNQQH IRHAACYYPS
201: PPGSYLGAAM PAATYYYDGP VPAPRLLMNS GGGAVAAAAP PAAAHDHGGG LAAESKLQVQ LLADMPPLHS PSSVDGGVVQ HHSYNDQIAA AAVAAESTTV
301: DWNLLSSLLP PAQLNFHHTP PPESPSSCSK NNNDA
101: AAGFWKATGR DKPVLSSTTT SRSSAAAGGI SVVIGMRKTL VFYRGRAPNG RKTDWIIHEY RLQSNEHAPA QEEGWVVCRA FQKPMPNQQH IRHAACYYPS
201: PPGSYLGAAM PAATYYYDGP VPAPRLLMNS GGGAVAAAAP PAAAHDHGGG LAAESKLQVQ LLADMPPLHS PSSVDGGVVQ HHSYNDQIAA AAVAAESTTV
301: DWNLLSSLLP PAQLNFHHTP PPESPSSCSK NNNDA
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.