CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046126_P001	Maize	cytosol, nucleus, plastid	91.27	90.76
TraesCS7D01G329200.1	Wheat	nucleus	79.15	76.36
HORVU7Hr1G079500.1	Barley	nucleus	79.15	75.95
CDY70728	Canola	nucleus	38.03	75.42
TraesCS7A01G349500.1	Wheat	nucleus	78.03	75.27
TraesCS7B01G233300.1	Wheat	nucleus	78.31	74.73
Os06t0530400-01	Rice	cytosol, nucleus, peroxisome	40.85	71.78
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	52.68	65.85
EES04857	Sorghum	nucleus	62.25	64.24
GSMUA_Achr10P...	Banana	nucleus	55.49	63.55
VIT_19s0085g01210.t01	Wine grape	nucleus	54.08	61.54
GSMUA_Achr10P...	Banana	nucleus	48.45	59.72
KRH43624	Soybean	cytosol, nucleus, peroxisome	54.65	59.15
PGSC0003DMT400025026	Potato	nucleus	53.8	58.95
KRH13825	Soybean	cytosol, nucleus, peroxisome	53.52	58.28
Solyc12g017400.1.1	Tomato	nucleus	52.11	57.99
CDY71976	Canola	nucleus	50.42	51.29
Bra008423.1-P	Field mustard	nucleus	50.14	51.0
CDY22285	Canola	nucleus	49.58	50.72
OQU76499	Sorghum	nucleus	40.85	50.7
GSMUA_Achr3P03500_001	Banana	nucleus	30.99	50.69
CDY70056	Canola	nucleus	50.42	50.14
Bra003602.1-P	Field mustard	nucleus	50.14	49.86
CDX87372	Canola	nucleus	50.42	49.72
Bra035127.1-P	Field mustard	nucleus	50.14	49.58
CDX88550	Canola	nucleus	50.42	49.31
AT1G79580.4	Thale cress	nucleus	50.7	48.52
OQU82026	Sorghum	nucleus	41.13	42.94
KXG31125	Sorghum	nucleus	41.41	42.36
OQU75680	Sorghum	nucleus	38.59	40.41
EES12234	Sorghum	nucleus	38.59	39.83
EER94595	Sorghum	cytosol, mitochondrion, nucleus	36.06	38.44
OQU93335	Sorghum	cytosol, mitochondrion, nucleus	38.87	37.2
EER87784	Sorghum	cytosol, nucleus, plastid	44.79	37.15
EES13158	Sorghum	nucleus	34.37	36.64
KXG24274	Sorghum	nucleus	41.69	35.32
EES14359	Sorghum	nucleus	32.96	34.93

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A194YJE9	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0048829	InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KXG20105	ProteinID:KXG20105
ProteinID:KXG20105.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF16	InterPro:SMB	EnsemblPlantsGene:SORBI_3010G155100	SUPFAM:SSF101941	UniParc:UPI0003C6EF62	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:45621730..45623894

Molecular Weight (calculated)

39667.3 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.521

Length

355 amino acids

Sequence
(BLAST)

001: MHPGGGPLSV PPGFRFHPTD EELLYYYLRK KVAYEPIDLD VIREIDLNKL EPWDLKERCR IGTGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD
101: KAIFLGNARR IGLRKTLVFY IGRAPHGKKT DWIMHEYRLD EENVEIQEEG WVVCRVFKKK SYHQRGLNPA EMALLEDDEL QPFPVPIPGS SLPTEHKNNP
201: HLMQYDFPSF DPSMQLPQLM SADQPVPTLL PSHPGPGVAM AMSSLDVECS QNNLTKLTAN GSDGMLHVHG GGAGGGVDRF AGTTDWSILD KLLASHQNLD
301: QLFHGKVTAA SASPPMAAYH QQLMELGGSS SSSSLQRLPL QYLGGETADL LRFPK

Best Arabidopsis Sequence Match ( AT1G79580.3 )
(BLAST)

001: MEIGSSSTVA GGGQLSVPPG FRFHPTEEEL LYYYLKKKVS YEPIDLDVIR EVDLNKLEPW ELKEKCRIGS GPQNEWYFFS HKDKKYPTGT RTNRATAAGF
101: WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI
201: DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD
301: KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP VNQRFPFHYL GNDANLLKFP K

Arabidopsis Description

SMBProtein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.