CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72666	Canola	nucleus	29.21	76.69
TraesCS7A01G068200.1	Wheat	cytosol, nucleus, plastid	35.05	75.38
Os06t0131700-01	Rice	nucleus	68.22	73.92
CDY35029	Canola	cytosol	31.07	63.94
Zm00001d045463_P001	Maize	nucleus	75.7	62.79
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	36.68	61.57
TraesCS7A01G068000.1	Wheat	cytosol, nucleus, plastid	59.11	61.56
TraesCS7D01G062100.1	Wheat	cytosol, nucleus, plastid	58.18	60.73
TraesCS7D01G062600.1	Wheat	cytosol, nucleus, plastid	55.84	60.51
TraesCS4A01G420000.1	Wheat	cytosol, nucleus, plastid	55.37	60.15
TraesCS7A01G068300.1	Wheat	cytosol, nucleus, plastid	55.84	60.05
TraesCS4A01G421300.1	Wheat	cytosol, nucleus, plastid	58.18	60.0
TraesCS7D01G062400.1	Wheat	nucleus	56.31	59.65
TraesCS4A01G420900.1	Wheat	cytosol, nucleus, plastid	55.84	59.6
TraesCS4A01G420200.1	Wheat	nucleus	56.78	59.56
TraesCS4A01G421200.1	Wheat	nucleus	56.31	59.51
TraesCS4A01G421100.1	Wheat	nucleus	55.37	59.4
TraesCS4A01G419900.1	Wheat	nucleus	53.97	59.38
TraesCS7D01G063300.1	Wheat	cytosol, nucleus, plastid	55.37	58.81
TraesCS4A01G420100.1	Wheat	nucleus	56.31	58.78
TraesCS7D01G062300.1	Wheat	cytosol, nucleus, plastid	55.61	57.91
Solyc10g005010.2.1	Tomato	nucleus	38.55	57.49
TraesCS4A01G421000.1	Wheat	nucleus	55.14	57.42
KRG97235	Soybean	nucleus	34.81	56.23
KRG97237	Soybean	nucleus	34.81	56.23
PGSC0003DMT400029321	Potato	nucleus	40.19	54.95
HORVU7Hr1G012780.1	Barley	nucleus	57.48	54.91
HORVU7Hr1G012760.6	Barley	plastid	55.61	51.97
CDY26917	Canola	nucleus	36.92	51.3
Bra010183.1-P	Field mustard	nucleus	36.92	51.3
VIT_15s0048g02660.t01	Wine grape	nucleus	46.26	51.3
Bra007640.1-P	Field mustard	cytosol, nucleus, plastid	36.92	49.07
CDY11382	Canola	cytosol, nucleus, plastid	36.92	49.07
CDY41554	Canola	nucleus	40.89	49.02
KXG24274	Sorghum	nucleus	47.9	48.93
CDY25087	Canola	cytosol, nucleus, peroxisome	37.15	48.77
CDX80045	Canola	nucleus	40.89	48.75
AT3G61910.1	Thale cress	nucleus	37.85	48.5
AT2G46770.1	Thale cress	nucleus	41.36	48.49
Bra004509.1-P	Field mustard	nucleus	40.65	48.47
CDX73267	Canola	cytosol	36.68	48.31
PGSC0003DMT400014872	Potato	nucleus	39.25	48.28
CDX76597	Canola	cytosol, nucleus, peroxisome	37.38	48.19
Bra040486.1-P	Field mustard	nucleus	40.89	48.08
Solyc08g008660.2.1	Tomato	nucleus	39.02	47.85
CDY27524	Canola	nucleus	40.42	47.53
PGSC0003DMT400031571	Potato	nucleus	40.89	47.3
Bra003478.1-P	Field mustard	nucleus	36.92	47.02
CDX67870	Canola	nucleus	36.92	47.02
AT1G32770.1	Thale cress	nucleus	39.02	46.65
VIT_02s0025g02710.t01	Wine grape	nucleus	43.46	45.93
KRH47818	Soybean	nucleus	42.76	45.75
Bra023288.1-P	Field mustard	nucleus	38.78	45.6
CDX93819	Canola	nucleus	38.78	45.6
CDY01243	Canola	nucleus	39.02	45.01
KXG20105	Sorghum	cytosol, nucleus, plastid	37.15	44.79
OQU82026	Sorghum	nucleus	34.58	43.53
KRH06383	Soybean	nucleus	44.39	42.89
EES04857	Sorghum	nucleus	34.35	42.73
KXG31125	Sorghum	nucleus	34.58	42.65
OQU75680	Sorghum	nucleus	33.41	42.18
EES12234	Sorghum	nucleus	33.88	42.15
EER94595	Sorghum	cytosol, mitochondrion, nucleus	30.14	38.74
OQU93335	Sorghum	cytosol, mitochondrion, nucleus	31.78	36.66
EES13158	Sorghum	nucleus	28.27	36.34
EES14359	Sorghum	nucleus	26.87	34.33
OQU76499	Sorghum	nucleus	22.66	33.92

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8069067	ProteinID:AAQ06260.1	EnsemblPlants:EER87784	ProteinID:EER87784
ProteinID:EER87784.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF39
UniProt:Q5NKS7	EnsemblPlantsGene:SORBI_3010G022400	SUPFAM:SSF101941	UniParc:UPI000049D9A4	RefSeq:XP_002436417.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:1840690..1844258

Molecular Weight (calculated)

45310.9 Da

IEP (calculated)

7.060

GRAVY (calculated)

-0.381

Length

428 amino acids

Sequence
(BLAST)

001: MSISVNGQSV VPPGFRFHPT EEELLTYYLK KKVASERIDL DVIRDVDLNK LEPWDIQEKC RIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYASGAR RIGMRKTLVF YKGRAPHGQK SDWIMHEYRL EPALDVDAAA GSASAHHAAA GAAADHHPYY TSSSPPALPT AIRGAAGDQQ AAQEQEGWVI
201: CRVFKKKNLV HHGQSSGGGV TAAGSKMASA AAPMEGSPSH CSSVTVISDH TMNKHQAQAM LQHSASDDDA LDHILQYMGG GGGKQPDTKP VLLDHHHHHH
301: LAAAATTTTT ACSAGGAGLY GKFMKLPPLE HAGGGGGLLP SPAGACDYGA ADASGIADWD ALDRLAAYEL NGLSDASKNM SAFFDEPSAT AAFSSSSSSV
401: HAAAVDGDLW SLARSVSALH ADLTMNNV

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.