Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G012740.1 | Barley | cytosol, nucleus, plastid | 13.84 | 98.41 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 83.26 | 90.75 |
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 82.81 | 90.49 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 83.48 | 90.12 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 37.72 | 84.92 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 46.88 | 82.35 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 68.53 | 75.8 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 68.08 | 75.5 |
| CDY72666 | Canola | nucleus | 27.23 | 74.85 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 68.08 | 74.75 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 65.4 | 74.18 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 66.29 | 74.06 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 64.96 | 73.86 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 65.18 | 73.37 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 63.62 | 73.26 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 65.85 | 73.2 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 66.96 | 73.17 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 66.96 | 72.99 |
| TraesCS7D01G062300.1 | Wheat | cytosol, nucleus, plastid | 66.29 | 72.26 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 63.84 | 71.68 |
| HORVU7Hr1G012760.6 | Barley | plastid | 66.96 | 65.5 |
| CDY35029 | Canola | cytosol | 29.69 | 63.94 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 51.34 | 62.67 |
| Os06t0131700-01 | Rice | nucleus | 54.91 | 62.28 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 54.91 | 57.48 |
| Solyc10g005010.2.1 | Tomato | nucleus | 36.38 | 56.79 |
| KRG97235 | Soybean | nucleus | 33.04 | 55.85 |
| KRG97237 | Soybean | nucleus | 32.81 | 55.47 |
| PGSC0003DMT400029321 | Potato | nucleus | 38.62 | 55.27 |
| CDY26917 | Canola | nucleus | 35.94 | 52.27 |
| Bra010183.1-P | Field mustard | nucleus | 35.94 | 52.27 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 35.94 | 50.0 |
| HORVU7Hr1G075550.1 | Barley | cytosol, nucleus, plastid | 44.42 | 50.0 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 35.94 | 50.0 |
| CDX73267 | Canola | cytosol | 35.71 | 49.23 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 36.38 | 49.1 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 35.71 | 49.08 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 41.96 | 48.7 |
| AT3G61910.1 | Thale cress | nucleus | 36.16 | 48.5 |
| AT2G46770.1 | Thale cress | nucleus | 39.51 | 48.49 |
| CDY41554 | Canola | nucleus | 38.62 | 48.46 |
| PGSC0003DMT400014872 | Potato | nucleus | 37.5 | 48.28 |
| Bra003478.1-P | Field mustard | nucleus | 36.16 | 48.21 |
| CDX67870 | Canola | nucleus | 36.16 | 48.21 |
| CDX80045 | Canola | nucleus | 38.62 | 48.19 |
| Bra004509.1-P | Field mustard | nucleus | 38.39 | 47.91 |
| Solyc08g008660.2.1 | Tomato | nucleus | 37.05 | 47.56 |
| PGSC0003DMT400031571 | Potato | nucleus | 38.84 | 47.03 |
| CDY27524 | Canola | nucleus | 37.95 | 46.7 |
| Bra040486.1-P | Field mustard | nucleus | 37.95 | 46.7 |
| CDX93819 | Canola | nucleus | 37.72 | 46.43 |
| Bra023288.1-P | Field mustard | nucleus | 37.72 | 46.43 |
| CDY01243 | Canola | nucleus | 38.17 | 46.09 |
| AT1G32770.1 | Thale cress | nucleus | 36.83 | 46.09 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 41.52 | 45.93 |
| Zm00001d045463_P001 | Maize | nucleus | 52.01 | 45.16 |
| KRH47818 | Soybean | nucleus | 40.18 | 45.0 |
| KRH06383 | Soybean | nucleus | 42.19 | 42.66 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 31.25 | 41.3 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 31.92 | 40.17 |
| HORVU7Hr1G079500.1 | Barley | nucleus | 33.04 | 40.0 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 29.46 | 37.82 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 26.56 | 37.19 |
| HORVU4Hr1G083050.3 | Barley | cytosol, mitochondrion, nucleus | 30.13 | 36.68 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 25.0 | 35.11 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287VJ26 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G012780 | EnsemblPlants:HORVU7Hr1G012780.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 |
| UniParc:UPI000B475849 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:18341302..18344773
Molecular Weight (calculated)
44441.8 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.479
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXERIIMS ISVNGQSVVP PGFRFHPTEE ELLTYYLAKK VASQRIDLDV IPDVDLNKLE PWDIQERCRI
101: GTGPQNDWYL FSHKDKKYPT GTRTNRATAA GFWKATGRDK AIYSAAGSGR IGMRKTLVFY KGRAPHGHKS DWIMHEYRLD DAVAIPSNPA NPGAGAYYSG
201: ASSPIRGVAG DQSSAQEDGW VICRVFKKKN IVVSQGQNGG GAASNKLSGA GAAPMERSQS NCSSTVTTIS SHIKAAQQQE HQQHQLLHYS ASDDALDHIL
301: SHYMHGRSPP TPCKQETKPA PSSGLDHLIN NTGCPNGTLY ERFMKLPPLE HVVSGGLLQP PTEYGGGGSG NNNSIGTDWD TLDRLATSYE LINGLSDSDV
401: ASASKNGGMA SFFVDGHGGA TVTGAGDGDL WSLARSASSL HADLTTMN
101: GTGPQNDWYL FSHKDKKYPT GTRTNRATAA GFWKATGRDK AIYSAAGSGR IGMRKTLVFY KGRAPHGHKS DWIMHEYRLD DAVAIPSNPA NPGAGAYYSG
201: ASSPIRGVAG DQSSAQEDGW VICRVFKKKN IVVSQGQNGG GAASNKLSGA GAAPMERSQS NCSSTVTTIS SHIKAAQQQE HQQHQLLHYS ASDDALDHIL
301: SHYMHGRSPP TPCKQETKPA PSSGLDHLIN NTGCPNGTLY ERFMKLPPLE HVVSGGLLQP PTEYGGGGSG NNNSIGTDWD TLDRLATSYE LINGLSDSDV
401: ASASKNGGMA SFFVDGHGGA TVTGAGDGDL WSLARSASSL HADLTTMN
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.