Factsheet for HORVU4Hr1G083050.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048456_P001	Maize	nucleus	38.04	95.89
TraesCS4D01G316800.1	Wheat	nucleus	95.38	95.64
TraesCS4B01G320300.1	Wheat	cytosol, mitochondrion, nucleus	94.84	95.1
TraesCS5A01G491700.1	Wheat	cytosol, mitochondrion, nucleus	94.57	94.82
OQU93335	Sorghum	cytosol, mitochondrion, nucleus	76.63	76.01
Zm00001d027459_P001	Maize	nucleus	75.0	72.82
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	11.14	65.08
VIT_04s0023g03110.t01	Wine grape	nucleus	58.42	64.18
GSMUA_Achr8P12100_001	Banana	nucleus	52.17	57.83
Solyc02g084350.2.1	Tomato	nucleus	54.62	57.59
Bra012065.1-P	Field mustard	nucleus	45.65	57.53
KRH69806	Soybean	nucleus	56.52	57.46
PGSC0003DMT400009136	Potato	nucleus	54.08	57.35
AT5G66300.1	Thale cress	nucleus	45.38	57.19
CDY45221	Canola	nucleus	45.65	57.14
CDY30778	Canola	nucleus	45.65	56.95
GSMUA_Achr11P...	Banana	nucleus	51.63	56.89
KRH08100	Soybean	nucleus	55.43	56.35
HORVU2Hr1G126080.3	Barley	nucleus	39.95	45.94
HORVU6Hr1G060800.3	Barley	nucleus	42.93	44.38
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	40.49	43.95
HORVU2Hr1G126040.14	Barley	nucleus	38.04	43.89
HORVU7Hr1G000140.6	Barley	nucleus	40.49	42.69
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	25.54	36.86
HORVU7Hr1G079500.1	Barley	nucleus	36.96	36.76
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	37.77	34.92
HORVU7Hr1G012780.1	Barley	nucleus	36.68	30.13
HORVU7Hr1G012760.6	Barley	plastid	36.68	29.48

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A287PW88	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0030154	GO:GO:0048759	GO:GO:1901348	EnsemblPlantsGene:HORVU4Hr1G083050	EnsemblPlants:HORVU4Hr1G083050.3	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF107	SUPFAM:SSF101941	UniParc:UPI000B47B884	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:623653277..623660493

Molecular Weight (calculated)

40665.5 Da

IEP (calculated)

5.535

GRAVY (calculated)

-0.611

Length

368 amino acids

Sequence
(BLAST)

001: MDSMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLTEHCGIG YEEQSEWYFF SFKDRKYPTG TRTNRATMAG FWKATGRDKA
101: VHERSRLIGM RKTLVFYKGR APNGQKTDWI MHEYRLETDE NAPPQAEGWV VCRAFKKRTA YPNRGMAERW GSNYSYNEVH AMGGAPFADP NMASTYAAAA
201: QMGRSGSFKE EAEQLDGAAA LLRYTSSHLV ELPQLESPSA PLPRKKARAP EEEDAASGAS RRRPRKLAQA DSAATTDWRA LDKFVASQLS PGGECAALEA
301: TAATTAAAAA GASSQAQAQA QLDRDEDDMA ALLFLNSDGR DEMERWTGLL GSAGAGVDGD LGICVFDK

Best Arabidopsis Sequence Match ( AT2G18060.1 )
(BLAST)

001: MEPMESCSVP PGFRFHPTDE ELVGYYLRKK IASQKIDLDV IRDIDLYRIE PWDLQEQCRI GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK
101: AVYDKTKLIG MRKTLVFYKG RAPNGKKSDW IMHEYRLESD ENAPPQEEGW VVCRAFKKRA TGQAKNTETW SSSYFYDEVA PNGVNSVMDP IDYISKQQHN
201: IFGKGLMCKQ ELEGMVDGIN YIQSNQFIQL PQLQSPSLPL MKRPSSSMSI TSMDNNYNYK LPLADEESFE SFIRGEDRRK KKKQVMMTGN WRELDKFVAS
301: QLMSQEDNGT SSFAGHHIVN EDKNNNDVEM DSSMFLSERE EENRFVSEFL STNSDYDIGI CVFDN

Arabidopsis Description

NAC037VND1 [Source:UniProtKB/TrEMBL;Acc:A0A178VM15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.