Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G316800.1 | Wheat | nucleus | 97.0 | 97.0 |
| TraesCS4B01G320300.1 | Wheat | cytosol, mitochondrion, nucleus | 97.0 | 97.0 |
| Zm00001d048456_P001 | Maize | nucleus | 37.87 | 95.21 |
| HORVU4Hr1G083050.3 | Barley | cytosol, mitochondrion, nucleus | 94.82 | 94.57 |
| OQU93335 | Sorghum | cytosol, mitochondrion, nucleus | 76.29 | 75.47 |
| Zm00001d027459_P001 | Maize | nucleus | 74.66 | 72.3 |
| VIT_04s0023g03110.t01 | Wine grape | nucleus | 58.58 | 64.18 |
| Solyc02g084350.2.1 | Tomato | nucleus | 55.59 | 58.45 |
| PGSC0003DMT400009136 | Potato | nucleus | 55.04 | 58.21 |
| KRH69806 | Soybean | nucleus | 57.22 | 58.01 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 52.04 | 57.53 |
| Bra012065.1-P | Field mustard | nucleus | 45.5 | 57.19 |
| GSMUA_Achr11P... | Banana | nucleus | 51.77 | 56.89 |
| AT5G66300.1 | Thale cress | nucleus | 45.23 | 56.85 |
| CDY45221 | Canola | nucleus | 45.5 | 56.8 |
| KRH08100 | Soybean | nucleus | 55.86 | 56.63 |
| CDY30778 | Canola | nucleus | 45.5 | 56.61 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 30.52 | 55.45 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 29.7 | 54.77 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 37.87 | 49.64 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 37.87 | 46.64 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 38.69 | 46.56 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 39.78 | 45.77 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 41.42 | 45.24 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 41.42 | 44.84 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 40.87 | 44.64 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 42.23 | 44.03 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 38.69 | 43.83 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 35.97 | 42.31 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 38.42 | 38.32 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 34.06 | 37.2 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 37.6 | 35.03 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 38.15 | 34.91 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 37.6 | 34.59 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 36.24 | 34.19 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 36.78 | 33.92 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 37.87 | 33.9 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 37.33 | 33.83 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 37.33 | 33.58 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 37.06 | 33.09 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 36.78 | 32.93 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 36.78 | 32.85 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 37.06 | 32.77 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0048759 | GO:GO:1901348 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF107 | SUPFAM:SSF101941 |
| EnsemblPlantsGene:TraesCS5A01G491700 | EnsemblPlants:TraesCS5A01G491700.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:660799217..660801937
Molecular Weight (calculated)
40971.8 Da
IEP (calculated)
5.232
GRAVY (calculated)
-0.718
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLTEHCGIG YEEQNEWYFF SFKDRKYPTG TRTNRATMAG FWKATGRDKA
101: VHERSRLIGM RKTLVFYKGR APNGQKTDWI MHEYRLETDE NAPPQEEGWV VCRAFKKRTA YPNRGMMERW GSNYSYNEVN AMSGAPFPDP NMASTYAAAA
201: QMGRGASFKE EAEQLDGAAA LLRYTSSHLV ELPQLESPSA PLPRKKARAP EEEEDAASGG SRRRPRKHAQ ADNETTKDWR ALDKFVASQL SPGGECGALE
301: ATAATTAGAA AGASSQMQAQ LDRDEDDMAA LLFLNSDGRD EMERWTGLLG SAGASVDGDL GICVFDK
101: VHERSRLIGM RKTLVFYKGR APNGQKTDWI MHEYRLETDE NAPPQEEGWV VCRAFKKRTA YPNRGMMERW GSNYSYNEVN AMSGAPFPDP NMASTYAAAA
201: QMGRGASFKE EAEQLDGAAA LLRYTSSHLV ELPQLESPSA PLPRKKARAP EEEEDAASGG SRRRPRKHAQ ADNETTKDWR ALDKFVASQL SPGGECGALE
301: ATAATTAGAA AGASSQMQAQ LDRDEDDMAA LLFLNSDGRD EMERWTGLLG SAGASVDGDL GICVFDK
001: MEPMESCSVP PGFRFHPTDE ELVGYYLRKK IASQKIDLDV IRDIDLYRIE PWDLQEQCRI GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK
101: AVYDKTKLIG MRKTLVFYKG RAPNGKKSDW IMHEYRLESD ENAPPQEEGW VVCRAFKKRA TGQAKNTETW SSSYFYDEVA PNGVNSVMDP IDYISKQQHN
201: IFGKGLMCKQ ELEGMVDGIN YIQSNQFIQL PQLQSPSLPL MKRPSSSMSI TSMDNNYNYK LPLADEESFE SFIRGEDRRK KKKQVMMTGN WRELDKFVAS
301: QLMSQEDNGT SSFAGHHIVN EDKNNNDVEM DSSMFLSERE EENRFVSEFL STNSDYDIGI CVFDN
101: AVYDKTKLIG MRKTLVFYKG RAPNGKKSDW IMHEYRLESD ENAPPQEEGW VVCRAFKKRA TGQAKNTETW SSSYFYDEVA PNGVNSVMDP IDYISKQQHN
201: IFGKGLMCKQ ELEGMVDGIN YIQSNQFIQL PQLQSPSLPL MKRPSSSMSI TSMDNNYNYK LPLADEESFE SFIRGEDRRK KKKQVMMTGN WRELDKFVAS
301: QLMSQEDNGT SSFAGHHIVN EDKNNNDVEM DSSMFLSERE EENRFVSEFL STNSDYDIGI CVFDN
Arabidopsis Description
NAC037VND1 [Source:UniProtKB/TrEMBL;Acc:A0A178VM15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.