Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G421200.1 | Wheat | nucleus | 87.97 | 86.67 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 42.11 | 84.42 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 80.95 | 79.17 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 49.87 | 78.04 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 76.44 | 77.41 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 79.2 | 77.07 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 76.94 | 76.56 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 74.44 | 74.62 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 76.69 | 74.45 |
| CDY72666 | Canola | nucleus | 30.08 | 73.62 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 71.68 | 73.52 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 73.18 | 71.05 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 73.43 | 70.6 |
| HORVU7Hr1G012760.6 | Barley | plastid | 80.95 | 70.52 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 71.68 | 63.84 |
| CDY35029 | Canola | cytosol | 32.08 | 61.54 |
| Os06t0131700-01 | Rice | nucleus | 59.9 | 60.51 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 54.89 | 59.67 |
| KRG97237 | Soybean | nucleus | 36.84 | 55.47 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 59.4 | 55.37 |
| KRG97235 | Soybean | nucleus | 36.34 | 54.72 |
| Solyc10g005010.2.1 | Tomato | nucleus | 38.85 | 54.01 |
| PGSC0003DMT400029321 | Potato | nucleus | 41.85 | 53.35 |
| Bra010183.1-P | Field mustard | nucleus | 39.6 | 51.3 |
| CDY26917 | Canola | nucleus | 39.6 | 51.3 |
| CDX73267 | Canola | cytosol | 39.35 | 48.31 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 46.62 | 48.19 |
| AT2G46770.1 | Thale cress | nucleus | 43.86 | 47.95 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 38.6 | 47.83 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 38.6 | 47.83 |
| PGSC0003DMT400014872 | Potato | nucleus | 41.6 | 47.7 |
| CDY41554 | Canola | nucleus | 42.61 | 47.62 |
| Solyc08g008660.2.1 | Tomato | nucleus | 41.6 | 47.56 |
| CDX80045 | Canola | nucleus | 42.61 | 47.35 |
| Bra004509.1-P | Field mustard | nucleus | 42.36 | 47.08 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 39.1 | 46.99 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 38.35 | 46.93 |
| CDY27524 | Canola | nucleus | 42.11 | 46.15 |
| Bra003478.1-P | Field mustard | nucleus | 38.85 | 46.13 |
| CDX67870 | Canola | nucleus | 38.85 | 46.13 |
| AT1G32770.1 | Thale cress | nucleus | 41.35 | 46.09 |
| Bra040486.1-P | Field mustard | nucleus | 41.85 | 45.88 |
| AT3G61910.1 | Thale cress | nucleus | 38.35 | 45.81 |
| CDX93819 | Canola | nucleus | 41.6 | 45.6 |
| Bra023288.1-P | Field mustard | nucleus | 41.6 | 45.6 |
| PGSC0003DMT400031571 | Potato | nucleus | 42.11 | 45.41 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 46.62 | 45.37 |
| CDY01243 | Canola | nucleus | 42.11 | 45.28 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 22.56 | 44.55 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 45.11 | 44.44 |
| Zm00001d045463_P001 | Maize | nucleus | 56.64 | 43.8 |
| KRH47818 | Soybean | nucleus | 43.61 | 43.5 |
| KRH06383 | Soybean | nucleus | 46.12 | 41.53 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 37.59 | 40.76 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 34.59 | 40.71 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 28.32 | 40.36 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 33.83 | 40.18 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 33.58 | 39.88 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 33.58 | 39.88 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 34.59 | 39.2 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 34.59 | 37.6 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 28.07 | 37.58 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 27.82 | 36.39 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 28.82 | 36.05 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 27.32 | 34.94 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 28.32 | 34.88 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4A01G421100 | EnsemblPlants:TraesCS4A01G421100.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:+:691246763..691249180
Molecular Weight (calculated)
43268.6 Da
IEP (calculated)
7.886
GRAVY (calculated)
-0.547
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGQSE VPPGFRFHPT EEELLTYYLA KKAASQRIDL DVIRDVDLNK LEPWDIQERC RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT GAGFWKATGR
101: DKAIYSASGS GTIGTRKTLV FYKGRAPHGH KSDWIMHEYR LDDAATPGNN SANPAAGNAS YHSGSSSPMR GVAQEDGWVI CRVFKKKNIV VQHQVGQNGG
201: GVAAASNKLV GVGAMERGRS NCSSTVATAS DHAKATQMQQ HHDALDHILN QYMHGRSTTT PCKQETKPTN PSSPALDDLI DSACHNRNST LYQKFMRLPQ
301: LEHVVPGGLL PLPSKYGSDW DALDRLAAYE LNGLSDPASA KTMNGMSIVD ELGSATAYSG GDTLHASSDT SDGDLWSLVR SVSSLHADLK ITCFNAVGC
101: DKAIYSASGS GTIGTRKTLV FYKGRAPHGH KSDWIMHEYR LDDAATPGNN SANPAAGNAS YHSGSSSPMR GVAQEDGWVI CRVFKKKNIV VQHQVGQNGG
201: GVAAASNKLV GVGAMERGRS NCSSTVATAS DHAKATQMQQ HHDALDHILN QYMHGRSTTT PCKQETKPTN PSSPALDDLI DSACHNRNST LYQKFMRLPQ
301: LEHVVPGGLL PLPSKYGSDW DALDRLAAYE LNGLSDPASA KTMNGMSIVD ELGSATAYSG GDTLHASSDT SDGDLWSLVR SVSSLHADLK ITCFNAVGC
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.