Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 95.13 | 95.37 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 94.89 | 93.98 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 40.88 | 84.42 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 90.75 | 83.26 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 51.58 | 83.14 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 76.16 | 76.72 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 74.94 | 76.05 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 75.43 | 75.61 |
| CDY72666 | Canola | nucleus | 29.68 | 74.85 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 71.53 | 74.62 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 74.21 | 74.21 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 71.78 | 74.12 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 70.07 | 74.04 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 71.78 | 73.57 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 71.05 | 73.18 |
| HORVU7Hr1G012760.6 | Barley | plastid | 72.75 | 65.28 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 57.66 | 64.58 |
| CDY35029 | Canola | cytosol | 32.12 | 63.46 |
| Os06t0131700-01 | Rice | nucleus | 60.83 | 63.29 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 61.56 | 59.11 |
| Solyc10g005010.2.1 | Tomato | nucleus | 40.15 | 57.49 |
| KRG97235 | Soybean | nucleus | 36.25 | 56.23 |
| KRG97237 | Soybean | nucleus | 36.01 | 55.85 |
| PGSC0003DMT400029321 | Potato | nucleus | 42.34 | 55.59 |
| CDY26917 | Canola | nucleus | 39.66 | 52.92 |
| Bra010183.1-P | Field mustard | nucleus | 39.66 | 52.92 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 39.17 | 50.0 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 39.17 | 50.0 |
| CDX73267 | Canola | cytosol | 39.42 | 49.85 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 39.66 | 49.1 |
| AT2G46770.1 | Thale cress | nucleus | 43.55 | 49.04 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 48.91 | 49.02 |
| CDY41554 | Canola | nucleus | 42.58 | 49.02 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 45.99 | 48.96 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 38.69 | 48.77 |
| CDX80045 | Canola | nucleus | 42.58 | 48.75 |
| PGSC0003DMT400014872 | Potato | nucleus | 41.12 | 48.56 |
| Bra004509.1-P | Field mustard | nucleus | 42.34 | 48.47 |
| AT3G61910.1 | Thale cress | nucleus | 39.17 | 48.2 |
| CDX67870 | Canola | nucleus | 39.17 | 47.92 |
| Bra003478.1-P | Field mustard | nucleus | 39.17 | 47.92 |
| Solyc08g008660.2.1 | Tomato | nucleus | 40.63 | 47.85 |
| PGSC0003DMT400031571 | Potato | nucleus | 43.07 | 47.84 |
| Bra023288.1-P | Field mustard | nucleus | 41.61 | 46.98 |
| Bra040486.1-P | Field mustard | nucleus | 41.61 | 46.98 |
| CDY27524 | Canola | nucleus | 41.61 | 46.98 |
| CDX93819 | Canola | nucleus | 41.61 | 46.98 |
| Zm00001d045463_P001 | Maize | nucleus | 58.64 | 46.71 |
| AT1G32770.1 | Thale cress | nucleus | 40.63 | 46.65 |
| CDY01243 | Canola | nucleus | 42.09 | 46.63 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 22.63 | 46.04 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 45.26 | 45.93 |
| KRH47818 | Soybean | nucleus | 43.8 | 45.0 |
| KRH06383 | Soybean | nucleus | 45.99 | 42.66 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 34.79 | 42.18 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 34.31 | 41.96 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 28.22 | 41.43 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 36.01 | 40.22 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 32.85 | 40.18 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 32.85 | 40.18 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 34.06 | 39.77 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 27.74 | 38.26 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 33.09 | 37.06 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 27.49 | 37.05 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 27.98 | 36.86 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 28.47 | 36.68 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 27.98 | 35.49 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7A01G068000 | EnsemblPlants:TraesCS7A01G068000.1 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:34103729..34106556
Molecular Weight (calculated)
44026.1 Da
IEP (calculated)
7.068
GRAVY (calculated)
-0.533
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYSATGS GRIGMRKTLV FYKGRAPHGH KSDWIMHEYR LDDAVPAPTA TNPAAAGDAS TYYSGTSSSP IRGVAGDQSS AQEDGWVICR VFKKKNIVVN
201: QGQNGGGGGA ASNKLAGVAP MERSQSNCSS TVTTISNHIK AAQQQDQQHQ LLHYSASDDA LDHILNHYMH GRSPTAPCKQ ETKPAAGSAL DHLINNTACP
301: NGTLYERFMK LPPLEHVASG GLLQPPATEY GGGGSGNNNI GTDWDSLDRL AASYELNGLS DDVASANKNS SMASFFADGH GGTTVAGAGD GDLWSLARSV
401: SSLHADLTTM N
101: DKAIYSATGS GRIGMRKTLV FYKGRAPHGH KSDWIMHEYR LDDAVPAPTA TNPAAAGDAS TYYSGTSSSP IRGVAGDQSS AQEDGWVICR VFKKKNIVVN
201: QGQNGGGGGA ASNKLAGVAP MERSQSNCSS TVTTISNHIK AAQQQDQQHQ LLHYSASDDA LDHILNHYMH GRSPTAPCKQ ETKPAAGSAL DHLINNTACP
301: NGTLYERFMK LPPLEHVASG GLLQPPATEY GGGGSGNNNI GTDWDSLDRL AASYELNGLS DDVASANKNS SMASFFADGH GGTTVAGAGD GDLWSLARSV
401: SSLHADLTTM N
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.