Factsheet for VIT_02s0025g02710.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	12.59	80.95
TraesCS7A01G068200.1	Wheat	cytosol, nucleus, plastid	32.59	66.33
VIT_15s0048g02660.t01	Wine grape	nucleus	60.0	62.95
Os08t0115800-01	Rice	nucleus	39.26	62.85
Bra010183.1-P	Field mustard	nucleus	46.42	61.04
CDY26917	Canola	nucleus	46.42	61.04
CDX73267	Canola	cytosol	46.17	57.54
CDX93819	Canola	nucleus	50.62	56.32
Bra023288.1-P	Field mustard	nucleus	50.37	56.04
AT1G32770.1	Thale cress	nucleus	49.38	55.87
CDY01243	Canola	nucleus	51.11	55.8
Zm00001d049678_P001	Maize	nucleus	47.16	50.4
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	31.6	50.2
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	49.14	50.0
VIT_19s0085g01210.t01	Wine grape	nucleus	38.02	49.36
TraesCS7A01G317100.1	Wheat	nucleus	49.63	49.02
TraesCS7D01G314000.2	Wheat	nucleus	49.38	48.78
KXG24274	Sorghum	nucleus	50.12	48.45
Zm00001d035084_P001	Maize	nucleus	49.14	47.61
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	42.72	47.14
Os06t0131700-01	Rice	nucleus	45.93	47.09
TraesCS7A01G068300.1	Wheat	cytosol, nucleus, plastid	45.93	46.73
TraesCS4A01G420900.1	Wheat	cytosol, nucleus, plastid	45.68	46.13
TraesCS7D01G062600.1	Wheat	cytosol, nucleus, plastid	44.69	45.82
TraesCS4A01G420000.1	Wheat	cytosol, nucleus, plastid	44.2	45.43
TraesCS7D01G062100.1	Wheat	cytosol, nucleus, plastid	45.93	45.37
TraesCS7A01G068000.1	Wheat	cytosol, nucleus, plastid	45.93	45.26
TraesCS4A01G421100.1	Wheat	nucleus	44.44	45.11
TraesCS7D01G062300.1	Wheat	cytosol, nucleus, plastid	45.68	45.01
TraesCS4A01G421200.1	Wheat	nucleus	44.94	44.94
TraesCS4A01G421300.1	Wheat	cytosol, nucleus, plastid	45.93	44.82
TraesCS7D01G062400.1	Wheat	nucleus	44.69	44.8
TraesCS4A01G420200.1	Wheat	nucleus	44.94	44.61
VIT_04s0023g03110.t01	Wine grape	nucleus	36.79	44.48
TraesCS4A01G419900.1	Wheat	nucleus	42.72	44.47
TraesCS4A01G421000.1	Wheat	nucleus	44.69	44.04
TraesCS7D01G063300.1	Wheat	cytosol, nucleus, plastid	43.7	43.92
VIT_02s0154g00020.t01	Wine grape	nucleus	38.52	43.7
EER87784	Sorghum	cytosol, nucleus, plastid	45.93	43.46
TraesCS4A01G420100.1	Wheat	nucleus	43.95	43.41
VIT_18s0089g01120.t01	Wine grape	nucleus	37.28	42.06
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	37.04	41.78
HORVU7Hr1G012780.1	Barley	nucleus	45.93	41.52
VIT_18s0072g01060.t01	Wine grape	nucleus	30.86	39.94
HORVU7Hr1G012760.6	Barley	plastid	44.94	39.74
Zm00001d045463_P001	Maize	nucleus	45.68	35.85

Protein Annotations

EntrezGene:100244394	wikigene:100244394	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:AM453420	ProteinID:CAN76671
ProteinID:CAN76671.1	ProteinID:CCB58305	ProteinID:CCB58305.1	UniProt:F6HU82	EMBL:FN596251	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987	GO:GO:0010047	GO:GO:0043565
GO:GO:0045893	InterPro:IPR003441	InterPro:IPR036093	EntrezGene:LOC100244394	wikigene:LOC100244394	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF39	SUPFAM:SSF101941
UniParc:UPI0001982D31	ArrayExpress:VIT_02s0025g02710	EnsemblPlantsGene:VIT_02s0025g02710	EnsemblPlants:VIT_02s0025g02710.t01	RefSeq:XP_002279545	RefSeq:XP_002279545.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:2347356..2348758

Molecular Weight (calculated)

46140.8 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.816

Length

405 amino acids

Sequence
(BLAST)

001: MSEDMNLSVN GQSQVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK
101: ATGRDKVIYS SFRRIGMRKT LVFYKGRAPH GQKSDWIMHE YRLEENTPVH DTMASNSLGE SMPEDGWVVC RVFRKKNYQK TLESPKSTSN SMDSRTQMLN
201: SSNDGVLDQI LSYMGRTCKQ ENEAISNVNF SDSNNTMRFL NQNNTGISEG LQERFMHLPR LESPTLPSLP NNSSHFDQER CFNIACLQSI DEMLRGSEPS
301: SENQGSGCNT TPVHDPKAGL NDWVAFDRLV ASQLNGQVDT KQLSCFSTDP NMGFCLSPDH DVELSHLRSS RPNPNPQNYN SEMDLWNFTR SSSSSSSDPL
401: GHLSV

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.