Factsheet for Os08t0115800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	21.74	87.3
CDY72666	Canola	nucleus	49.41	76.69
Os04t0536500-01	Rice	cytosol	42.29	66.05
CDY35029	Canola	cytosol	52.57	63.94
Os06t0530400-01	Rice	cytosol, nucleus, peroxisome	45.85	57.43
Solyc10g005010.2.1	Tomato	nucleus	58.1	51.22
KRG97235	Soybean	nucleus	53.36	50.94
Zm00001d049678_P001	Maize	nucleus	76.28	50.92
KXG24274	Sorghum	nucleus	84.19	50.84
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	79.84	50.75
KRG97237	Soybean	nucleus	52.96	50.57
TraesCS7D01G314000.2	Wheat	nucleus	81.42	50.24
TraesCS7A01G317100.1	Wheat	nucleus	81.42	50.24
PGSC0003DMT400029321	Potato	nucleus	59.68	48.24
CDY26917	Canola	nucleus	55.34	45.45
Bra010183.1-P	Field mustard	nucleus	55.34	45.45
CDY11382	Canola	cytosol, nucleus, plastid	56.92	44.72
Bra007640.1-P	Field mustard	cytosol, nucleus, plastid	56.92	44.72
CDY41554	Canola	nucleus	62.45	44.26
CDX80045	Canola	nucleus	62.45	44.01
CDY25087	Canola	cytosol, nucleus, peroxisome	56.52	43.87
AT2G46770.1	Thale cress	nucleus	63.24	43.84
Bra004509.1-P	Field mustard	nucleus	62.06	43.73
CDX76597	Canola	cytosol, nucleus, peroxisome	56.52	43.07
Bra040486.1-P	Field mustard	nucleus	61.66	42.86
CDX73267	Canola	cytosol	54.94	42.77
Bra003478.1-P	Field mustard	nucleus	56.52	42.56
CDX67870	Canola	nucleus	56.52	42.56
Os06t0131700-01	Rice	nucleus	66.4	42.53
PGSC0003DMT400014872	Potato	nucleus	58.5	42.53
Solyc08g008660.2.1	Tomato	nucleus	58.5	42.41
CDY27524	Canola	nucleus	60.87	42.31
GSMUA_Achr7P05980_001	Banana	nucleus	58.1	42.24
AT3G61910.1	Thale cress	nucleus	55.73	42.22
VIT_15s0048g02660.t01	Wine grape	nucleus	64.03	41.97
AT1G32770.1	Thale cress	nucleus	57.31	40.5
KRH47818	Soybean	nucleus	63.64	40.25
PGSC0003DMT400031571	Potato	nucleus	58.5	40.0
VIT_02s0025g02710.t01	Wine grape	nucleus	62.85	39.26
CDX93819	Canola	nucleus	56.13	39.01
CDY01243	Canola	nucleus	56.92	38.81
Bra023288.1-P	Field mustard	nucleus	55.73	38.74
KRH06383	Soybean	nucleus	64.03	36.57
Os04t0691300-00	Rice	cytosol, nucleus	40.71	36.01
Os02t0643600-00	Rice	nucleus	50.99	34.86
Os02t0252200-01	Rice	nucleus	49.41	34.82
Os10t0532000-01	Rice	cytosol	45.85	34.02
Os08t0103900-01	Rice	nucleus	41.9	32.72
Os06t0104200-01	Rice	nucleus	47.04	32.69
Os04t0443801-02	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:BAD10567.1	ProteinID:BAD33085.1	ProteinID:BAF22766.1	ProteinID:BAT03550.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	EnsemblPlantsGene:Os08g0115800	EnsemblPlants:Os08t0115800-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF39	UniProt:Q6YXS5	SUPFAM:SSF101941	UniParc:UPI000023AE17	SEG:seg	:

Description

NAC DOMAIN-CONTAINING PROTEIN 29No apical meristem (NAM) protein domain containing protein. (Os08t0115800-01)

Coordinates

chr8:+:856107..858238

Molecular Weight (calculated)

27610.3 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.674

Length

253 amino acids

Sequence
(BLAST)

001: MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVASEQIDL DVIRDVDLNK LEPWDIQERC KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYNAVHR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD DPATDTAAAT PTVTSAAAAA AAMAAAADGG QEDGWVVCRV FKKKHHHKEA GGGGGKHGGD
201: GSAGAKAAHA YSSSDDALDQ ILQYMGRSCK QEHELPPPPT TCCSTTTTAR TGP

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.