Factsheet for Os06t0530400-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70728	Canola	nucleus	57.43	64.8
Os04t0536500-01	Rice	cytosol	50.99	63.58
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	66.83	47.54
Os08t0115800-01	Rice	nucleus	57.43	45.85
VIT_19s0085g01210.t01	Wine grape	nucleus	68.81	44.55
GSMUA_Achr10P...	Banana	nucleus	61.88	43.4
Solyc12g017400.1.1	Tomato	nucleus	67.82	42.95
PGSC0003DMT400025026	Potato	nucleus	68.32	42.59
GSMUA_Achr3P03500_001	Banana	nucleus	45.54	42.4
GSMUA_Achr10P...	Banana	nucleus	64.85	42.26
KRH43624	Soybean	cytosol, nucleus, peroxisome	67.82	41.77
KRH13825	Soybean	cytosol, nucleus, peroxisome	67.33	41.72
KXG20105	Sorghum	cytosol, nucleus, plastid	71.78	40.85
TraesCS7A01G349500.1	Wheat	nucleus	74.26	40.76
TraesCS7D01G329200.1	Wheat	nucleus	74.26	40.76
TraesCS7B01G233300.1	Wheat	nucleus	74.26	40.32
HORVU7Hr1G079500.1	Barley	nucleus	73.76	40.27
Zm00001d037029_P001	Maize	nucleus	72.28	39.89
Zm00001d046126_P001	Maize	cytosol, nucleus, plastid	70.3	39.78
Os02t0252200-01	Rice	nucleus	68.32	38.44
CDY22285	Canola	nucleus	60.89	35.45
CDY71976	Canola	nucleus	60.89	35.24
Bra008423.1-P	Field mustard	nucleus	60.4	34.96
CDY70056	Canola	nucleus	60.89	34.45
Bra035127.1-P	Field mustard	nucleus	60.89	34.26
CDX87372	Canola	nucleus	60.89	34.17
Bra003602.1-P	Field mustard	nucleus	59.9	33.89
CDX88550	Canola	nucleus	60.89	33.88
AT1G79580.4	Thale cress	nucleus	61.39	33.42
Os04t0691300-00	Rice	cytosol, nucleus	42.57	30.07
Os06t0131700-01	Rice	nucleus	57.92	29.62
Os10t0532000-01	Rice	cytosol	50.0	29.62
Os08t0103900-01	Rice	nucleus	46.53	29.01
OQU76499	Sorghum	nucleus	40.59	28.67
Os02t0643600-00	Rice	nucleus	51.49	28.11
Os06t0104200-01	Rice	nucleus	50.49	28.02
Os04t0443801-02	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A0P0WXJ0	ProteinID:BAS98058.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0048829	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	EnsemblPlantsGene:Os06g0530400	EnsemblPlants:Os06t0530400-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF16	InterPro:SMB	SUPFAM:SSF101941	UniParc:UPI000393B40B	SEG:seg	:

Description

NAC DOMAIN-CONTAINING PROTEIN 7Similar to NAC domain-containing protein 76. (Os06t0530400-01)

Coordinates

chr6:-:19743865..19746351

Molecular Weight (calculated)

23665.7 Da

IEP (calculated)

9.555

GRAVY (calculated)

-0.345

Length

202 amino acids

Sequence
(BLAST)

001: MHPSGGALSV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR IGTGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD
101: KAIFLANACR IGMRKTLVFY VGRAPHGKKT DWIMHEYRLD QDNVDVQVYI YIYIYIYLTS AKTICNIKFT IYILSIHEMP KSCMISRLMS TGTPSVQIYK
201: YF

Best Arabidopsis Sequence Match ( AT1G79580.3 )
(BLAST)

001: MEIGSSSTVA GGGQLSVPPG FRFHPTEEEL LYYYLKKKVS YEPIDLDVIR EVDLNKLEPW ELKEKCRIGS GPQNEWYFFS HKDKKYPTGT RTNRATAAGF
101: WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI
201: DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD
301: KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP VNQRFPFHYL GNDANLLKFP K

Arabidopsis Description

SMBProtein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.