Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20105 | Sorghum | cytosol, nucleus, plastid | 90.76 | 91.27 |
| Zm00001d037029_P001 | Maize | nucleus | 86.83 | 84.7 |
| CDY70728 | Canola | nucleus | 38.38 | 76.54 |
| HORVU7Hr1G079500.1 | Barley | nucleus | 77.03 | 74.32 |
| TraesCS7D01G329200.1 | Wheat | nucleus | 76.47 | 74.18 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 75.91 | 73.64 |
| TraesCS7B01G233300.1 | Wheat | nucleus | 75.91 | 72.85 |
| Zm00001d048456_P001 | Maize | nucleus | 29.13 | 71.23 |
| Os06t0530400-01 | Rice | cytosol, nucleus, peroxisome | 39.78 | 70.3 |
| GSMUA_Achr2P20020_001 | Banana | cytosol, nucleus, plastid | 50.7 | 63.73 |
| GSMUA_Achr10P... | Banana | nucleus | 53.78 | 61.94 |
| Zm00001d016119_P001 | Maize | cytosol, nucleus, plastid | 60.5 | 61.89 |
| VIT_19s0085g01210.t01 | Wine grape | nucleus | 52.94 | 60.58 |
| Zm00001d051294_P001 | Maize | cytosol | 29.41 | 60.0 |
| Zm00001d045600_P001 | Maize | nucleus | 22.97 | 58.99 |
| PGSC0003DMT400025026 | Potato | nucleus | 52.66 | 58.02 |
| GSMUA_Achr10P... | Banana | nucleus | 46.22 | 57.29 |
| KRH43624 | Soybean | cytosol, nucleus, peroxisome | 52.1 | 56.71 |
| KRH13825 | Soybean | cytosol, nucleus, peroxisome | 51.54 | 56.44 |
| Solyc12g017400.1.1 | Tomato | nucleus | 50.14 | 56.11 |
| CDY71976 | Canola | nucleus | 49.86 | 51.0 |
| Bra008423.1-P | Field mustard | nucleus | 49.58 | 50.72 |
| CDY22285 | Canola | nucleus | 49.02 | 50.43 |
| CDY70056 | Canola | nucleus | 50.14 | 50.14 |
| GSMUA_Achr3P03500_001 | Banana | nucleus | 30.25 | 49.77 |
| Bra003602.1-P | Field mustard | nucleus | 49.58 | 49.58 |
| CDX87372 | Canola | nucleus | 49.86 | 49.44 |
| Bra035127.1-P | Field mustard | nucleus | 49.58 | 49.3 |
| CDX88550 | Canola | nucleus | 49.86 | 49.04 |
| AT1G79580.4 | Thale cress | nucleus | 50.7 | 48.79 |
| Zm00001d017396_P001 | Maize | nucleus | 24.93 | 41.78 |
| Zm00001d002828_P001 | Maize | cytosol | 40.06 | 41.57 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 41.46 | 40.33 |
| Zm00001d003583_P001 | Maize | nucleus | 36.41 | 39.88 |
| Zm00001d034984_P001 | Maize | nucleus | 30.81 | 39.71 |
| Zm00001d050039_P001 | Maize | nucleus | 31.65 | 38.31 |
| Zm00001d025483_P001 | Maize | nucleus | 35.85 | 38.1 |
| Zm00001d049678_P001 | Maize | nucleus | 40.34 | 37.99 |
| Zm00001d002934_P001 | Maize | nucleus | 33.33 | 36.28 |
| Zm00001d027459_P001 | Maize | nucleus | 37.53 | 35.36 |
| Zm00001d035084_P001 | Maize | nucleus | 40.62 | 34.69 |
| Zm00001d045463_P001 | Maize | nucleus | 42.86 | 29.65 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:AQL03742.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0048829 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:K7W9B6 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF16 | InterPro:SMB |
| SUPFAM:SSF101941 | UniParc:UPI0002210FCD | EnsemblPlantsGene:Zm00001d046126 | EnsemblPlants:Zm00001d046126_P001 | EnsemblPlants:Zm00001d046126_T001 | SEG:seg |
Description
NAC-transcription factor 124Putative NAC domain transcription factor superfamily protein
Coordinates
chr9:-:65016935..65018861
Molecular Weight (calculated)
40014.6 Da
IEP (calculated)
6.847
GRAVY (calculated)
-0.485
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPGVGPLSV PPGFRFHPTD EELLYYYLRK KVAYEPIDLD VIREIDLNKL EPWDLKERCK IGTGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD
101: KAIFLGSARR IGLRKTLVFY IGRAPHGKKT EWIMHEYRLD EENVEIQEDG WVVCRVFKKK NYEQRGHNMA EMAALDDDEL QPFTVPVVPA GTSSLPTTDH
201: KNNPHLMQYD FPSFDPSMQL PQLMSADQPV PTLFPSHPGV ATAMSSSIDV ECSQNLLTML TSNGSDGMLH VRAGGAGAGV DRFAGTTDWS ILDKLLASHQ
301: NLDQLFHGKV TAASASPMAP YHQQLMELGG SSSSSSLQRL PLQYLSGETT DLLRFPK
101: KAIFLGSARR IGLRKTLVFY IGRAPHGKKT EWIMHEYRLD EENVEIQEDG WVVCRVFKKK NYEQRGHNMA EMAALDDDEL QPFTVPVVPA GTSSLPTTDH
201: KNNPHLMQYD FPSFDPSMQL PQLMSADQPV PTLFPSHPGV ATAMSSSIDV ECSQNLLTML TSNGSDGMLH VRAGGAGAGV DRFAGTTDWS ILDKLLASHQ
301: NLDQLFHGKV TAASASPMAP YHQQLMELGG SSSSSSLQRL PLQYLSGETT DLLRFPK
001: MEIGSSSTVA GGGQLSVPPG FRFHPTEEEL LYYYLKKKVS YEPIDLDVIR EVDLNKLEPW ELKEKCRIGS GPQNEWYFFS HKDKKYPTGT RTNRATAAGF
101: WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI
201: DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD
301: KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP VNQRFPFHYL GNDANLLKFP K
101: WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI
201: DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD
301: KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP VNQRFPFHYL GNDANLLKFP K
Arabidopsis Description
SMBProtein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.