Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048456_P001 | Maize | nucleus | 38.99 | 73.97 |
| Zm00001d050039_P001 | Maize | nucleus | 68.23 | 64.07 |
| Zm00001d051294_P001 | Maize | cytosol | 36.82 | 58.29 |
| Zm00001d045600_P001 | Maize | nucleus | 29.24 | 58.27 |
| EES14359 | Sorghum | nucleus | 68.59 | 56.72 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 61.37 | 54.49 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 61.37 | 54.49 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 61.01 | 54.17 |
| Os08t0103900-01 | Rice | nucleus | 61.73 | 52.78 |
| Zm00001d002934_P001 | Maize | nucleus | 57.4 | 48.48 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 51.26 | 47.02 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 42.24 | 46.99 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 46.93 | 45.45 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 48.38 | 42.81 |
| PGSC0003DMT400002318 | Potato | nucleus | 47.65 | 41.77 |
| Solyc11g018660.1.1 | Tomato | nucleus | 46.57 | 41.48 |
| Solyc06g065410.2.1 | Tomato | nucleus | 48.01 | 41.3 |
| AT1G71930.2 | Thale cress | nucleus | 47.65 | 40.74 |
| Bra016098.1-P | Field mustard | nucleus | 47.29 | 40.56 |
| PGSC0003DMT400067086 | Potato | nucleus | 48.01 | 40.43 |
| CDX96362 | Canola | nucleus | 47.29 | 40.31 |
| CDX72846 | Canola | nucleus | 47.29 | 40.31 |
| CDX82202 | Canola | nucleus | 47.29 | 40.06 |
| Bra007996.1-P | Field mustard | nucleus | 46.93 | 39.76 |
| CDY03671 | Canola | nucleus | 46.93 | 39.76 |
| KRG91808 | Soybean | nucleus | 46.57 | 37.83 |
| KRH34977 | Soybean | nucleus | 46.21 | 36.99 |
| Zm00001d017396_P001 | Maize | nucleus | 27.08 | 35.21 |
| Zm00001d027459_P001 | Maize | nucleus | 46.93 | 34.3 |
| Zm00001d002828_P001 | Maize | cytosol | 41.88 | 33.72 |
| Zm00001d003583_P001 | Maize | nucleus | 39.35 | 33.44 |
| Zm00001d016119_P001 | Maize | cytosol, nucleus, plastid | 40.07 | 31.81 |
| Zm00001d025483_P001 | Maize | nucleus | 38.27 | 31.55 |
| Zm00001d046126_P001 | Maize | cytosol, nucleus, plastid | 39.71 | 30.81 |
| Zm00001d049678_P001 | Maize | nucleus | 41.52 | 30.34 |
| Zm00001d037029_P001 | Maize | nucleus | 40.07 | 30.33 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 39.71 | 29.97 |
| Zm00001d035084_P001 | Maize | nucleus | 41.52 | 27.51 |
| Zm00001d045463_P001 | Maize | nucleus | 40.07 | 21.51 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6LDD2 | ProteinID:AQK78032.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF103 | SUPFAM:SSF101941 | UniParc:UPI000221393D | EnsemblPlantsGene:Zm00001d034984 |
| EnsemblPlants:Zm00001d034984_P001 | EnsemblPlants:Zm00001d034984_T001 | SEG:seg | : | : | : |
Description
NAC-transcription factor 62Putative NAC domain transcription factor superfamily protein
Coordinates
chr6:-:798676..799889
Molecular Weight (calculated)
31007.1 Da
IEP (calculated)
7.094
GRAVY (calculated)
-0.655
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAAMADDEQ QQAAAYACVP PGFRFHPTEE ELVGYYLARK VASQKIDDLD IIREVDLYRI EPWDLQVQER CGYYGGGQDQ EEPTEYYFFS YKDRKYPSGT
101: RTNRATAAGF WKATGRDKPV LSSSSSGVVI GMRKTLVFYR GRAPNGRKTD WIIHEYRLQS NEHAPAQEEG WVVCRAFHKP MPNHHHHMIR HAAASCCYYY
201: PAPAAAPPAA GLPPHNGHLH LHSPSAESAV DWNLLSSLLP PGQLDFVHHT LTPPPASSPS SCSTTTTTTT TRNNNNE
101: RTNRATAAGF WKATGRDKPV LSSSSSGVVI GMRKTLVFYR GRAPNGRKTD WIIHEYRLQS NEHAPAQEEG WVVCRAFHKP MPNHHHHMIR HAAASCCYYY
201: PAPAAAPPAA GLPPHNGHLH LHSPSAESAV DWNLLSSLLP PGQLDFVHHT LTPPPASSPS SCSTTTTTTT TRNNNNE
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.