Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002318 | Potato | nucleus | 93.89 | 92.41 |
| Solyc06g065410.2.1 | Tomato | nucleus | 67.52 | 65.22 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 60.45 | 60.06 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 36.66 | 56.44 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 42.77 | 53.41 |
| KRG91808 | Soybean | nucleus | 58.2 | 53.08 |
| KRH34977 | Soybean | nucleus | 58.2 | 52.31 |
| AT1G71930.2 | Thale cress | nucleus | 53.7 | 51.54 |
| Bra016098.1-P | Field mustard | nucleus | 53.05 | 51.08 |
| CDX72846 | Canola | nucleus | 53.05 | 50.77 |
| CDX96362 | Canola | nucleus | 53.05 | 50.77 |
| CDX82202 | Canola | nucleus | 53.05 | 50.46 |
| Bra007996.1-P | Field mustard | nucleus | 52.73 | 50.15 |
| CDY03671 | Canola | nucleus | 52.73 | 50.15 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 39.87 | 48.25 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 43.41 | 48.21 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 45.66 | 47.02 |
| Zm00001d034984_P001 | Maize | nucleus | 41.48 | 46.57 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 44.37 | 46.31 |
| TraesCS2B01G627000.1 | Wheat | nucleus | 44.37 | 46.0 |
| TraesCS2D01G576400.1 | Wheat | nucleus | 44.69 | 45.57 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 44.69 | 45.57 |
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 45.34 | 44.76 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 45.98 | 44.69 |
| Solyc02g084350.2.1 | Tomato | nucleus | 49.84 | 44.41 |
| TraesCS2D01G576500.2 | Wheat | nucleus | 45.02 | 44.3 |
| TraesCS2D01G576200.1 | Wheat | nucleus | 45.02 | 44.16 |
| TraesCS2B01G627200.1 | Wheat | nucleus | 45.02 | 44.16 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 44.05 | 43.91 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 45.02 | 43.89 |
| Zm00001d050039_P001 | Maize | nucleus | 41.48 | 43.73 |
| TraesCS2B01G627100.1 | Wheat | nucleus | 44.05 | 43.63 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 43.73 | 43.59 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 43.73 | 43.59 |
| Solyc08g079120.1.1 | Tomato | cytosol, nucleus, plastid | 42.77 | 43.32 |
| Os08t0103900-01 | Rice | nucleus | 44.37 | 42.59 |
| EES13158 | Sorghum | nucleus | 45.34 | 42.34 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 44.05 | 42.28 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 43.09 | 42.01 |
| Solyc03g083880.2.1 | Tomato | nucleus | 42.12 | 41.99 |
| Zm00001d002934_P001 | Maize | nucleus | 44.05 | 41.77 |
| Solyc10g005010.2.1 | Tomato | nucleus | 37.62 | 40.77 |
| EES14359 | Sorghum | nucleus | 43.09 | 40.0 |
| Solyc06g034340.1.1 | Tomato | nucleus | 43.09 | 39.41 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 34.73 | 37.76 |
| Solyc12g017400.1.1 | Tomato | nucleus | 37.62 | 36.68 |
| Solyc06g063430.1.1 | Tomato | nucleus | 36.66 | 35.85 |
| Solyc08g008660.2.1 | Tomato | nucleus | 36.98 | 32.95 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:K4D6S0 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF41 | SUPFAM:SSF101941 | EnsemblPlantsGene:Solyc11g018660.1 | EnsemblPlants:Solyc11g018660.1.1 | UniParc:UPI000276AA70 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:8887768..8890395
Molecular Weight (calculated)
36057.9 Da
IEP (calculated)
6.347
GRAVY (calculated)
-0.886
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIESCVPPG FRFHPTEEEL VGYYLKRKIN SLKIDLDVIT DIDLYRMEPW DIQDRCKLGY EEESEWYFFS HKDRKYPTGT RTNRATGAGF WKATGRDKAV
101: LSKEKIIGMR KTLVFYRGRA PNGRKSDWIM HEYRLQTSQH GPPQEEGWVV CRAFKKPSPS NNNYYMRGTN TSYSTRPPPS LSQMPSYYIT NINPLNQTSN
201: FNHQFPLNHQ ISSQNNIGYD NNQLLIHELP QLDSPTTIST SLATNDHQGQ NSINNNNNED QFCDEWSVDD KLFAPQVMEA PSSSSYSYPN FLLDGNDQNH
301: MSQLLHCYPD L
101: LSKEKIIGMR KTLVFYRGRA PNGRKSDWIM HEYRLQTSQH GPPQEEGWVV CRAFKKPSPS NNNYYMRGTN TSYSTRPPPS LSQMPSYYIT NINPLNQTSN
201: FNHQFPLNHQ ISSQNNIGYD NNQLLIHELP QLDSPTTIST SLATNDHQGQ NSINNNNNED QFCDEWSVDD KLFAPQVMEA PSSSSYSYPN FLLDGNDQNH
301: MSQLLHCYPD L
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.