Factsheet for TraesCS2B01G627000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G566000.1	Wheat	nucleus	84.33	84.9
HORVU2Hr1G126080.3	Barley	nucleus	89.67	84.06
HORVU2Hr1G126040.14	Barley	nucleus	88.0	82.76
TraesCS2B01G627200.1	Wheat	nucleus	87.0	82.33
TraesCS2D01G576200.1	Wheat	nucleus	86.67	82.02
TraesCS2A01G565900.1	Wheat	cytosol, nucleus, plastid	54.67	81.19
TraesCS2B01G627100.1	Wheat	nucleus	83.0	79.3
TraesCS2A01G566300.1	Wheat	nucleus	80.67	74.69
TraesCS7B01G226600.1	Wheat	nucleus	56.0	53.85
GSMUA_Achr3P22360_001	Banana	nucleus	53.0	52.65
GSMUA_Achr7P23170_001	Banana	nucleus	43.33	52.21
Os08t0103900-01	Rice	nucleus	55.67	51.54
VIT_18s0072g01060.t01	Wine grape	nucleus	47.67	45.69
Os04t0691300-00	Rice	cytosol, nucleus	42.33	44.41
Solyc11g018660.1.1	Tomato	nucleus	46.0	44.37
PGSC0003DMT400002318	Potato	nucleus	46.33	43.99
Solyc06g065410.2.1	Tomato	nucleus	47.0	43.79
PGSC0003DMT400067086	Potato	nucleus	47.0	42.86
CDX96362	Canola	nucleus	45.67	42.15
CDX72846	Canola	nucleus	45.67	42.15
Bra016098.1-P	Field mustard	nucleus	45.33	42.11
AT1G71930.2	Thale cress	nucleus	45.33	41.98
CDY03671	Canola	nucleus	45.67	41.9
Bra007996.1-P	Field mustard	nucleus	45.67	41.9
CDX82202	Canola	nucleus	45.33	41.59
KRG91808	Soybean	nucleus	47.0	41.35
KRH34977	Soybean	nucleus	47.33	41.04
TraesCS4B01G320300.1	Wheat	cytosol, mitochondrion, nucleus	46.0	37.6
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	41.0	36.28
TraesCS2B01G328300.1	Wheat	nucleus	38.0	33.93
TraesCS6B01G286200.1	Wheat	cytosol	42.33	33.33
TraesCS7B01G233300.1	Wheat	nucleus	39.33	31.72

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF103	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS2B01G627000	EnsemblPlants:TraesCS2B01G627000.1	SEG:seg

Description

No Description!

Coordinates

chr2B:+:798957711..798958828

Molecular Weight (calculated)

33167.6 Da

IEP (calculated)

6.422

GRAVY (calculated)

-0.589

Length

300 amino acids

Sequence
(BLAST)

001: MLAMDQHHQQ EESCVPPGFR FHPTEEELVG YYLARKVAAQ TIDLDIIQEV DLYRIEPWDL QERCSGAGGR GARQAAEDEQ SSSEWYFFSF KDRKYPSGTR
101: TNRATAAGFW KATGRDKPVT SSRSRGVIGM RKTLVFYRGR APNGRKTDWI IHEYRLQTNE HAPTQEEGWV VCRAFQKPAP NQRPSYIFPA YAAAPGYDAR
201: PWLHGQGGDI HYLQSTAGAA GAGGLGFPGQ GIQYSDDVLE SKQSLFGNIP QLIQSPPTTT AVAGGGDAGY DIVQQGQAAA GIDWNFLDSL LSSSHLHIEQ

Best Arabidopsis Sequence Match ( AT1G71930.1 )
(BLAST)

001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS

Arabidopsis Description

NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.