Factsheet for Bra016098.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96362	Canola	nucleus	99.07	98.46
CDX72846	Canola	nucleus	97.83	97.23
AT1G71930.2	Thale cress	nucleus	92.88	92.59
Bra007996.1-P	Field mustard	nucleus	88.85	87.77
TraesCS2A01G565900.1	Wheat	cytosol, nucleus, plastid	35.6	56.93
VIT_18s0072g01060.t01	Wine grape	nucleus	53.87	55.59
Solyc06g065410.2.1	Tomato	nucleus	53.56	53.73
PGSC0003DMT400067086	Potato	nucleus	54.18	53.19
PGSC0003DMT400002318	Potato	nucleus	52.01	53.16
Solyc11g018660.1.1	Tomato	nucleus	51.08	53.05
Bra039915.1-P	Field mustard	nucleus	42.72	51.11
KRG91808	Soybean	nucleus	53.25	50.44
KRH34977	Soybean	nucleus	53.87	50.29
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	39.63	49.81
TraesCS2A01G566400.1	Wheat	nucleus	41.18	47.5
GSMUA_Achr3P22360_001	Banana	nucleus	44.27	47.35
Zm00001d034984_P001	Maize	nucleus	40.56	47.29
GSMUA_Achr7P23170_001	Banana	nucleus	36.22	46.99
TraesCS2B01G627000.1	Wheat	nucleus	42.11	45.33
TraesCS2A01G566000.1	Wheat	nucleus	41.8	45.3
TraesCS2D01G576400.1	Wheat	nucleus	42.72	45.25
Bra012065.1-P	Field mustard	nucleus	40.56	44.86
TraesCS2D01G576300.1	Wheat	cytosol, mitochondrion, nucleus	43.03	44.13
Zm00001d050039_P001	Maize	nucleus	40.25	44.07
TraesCS2B01G627100.1	Wheat	nucleus	42.72	43.95
Os08t0103900-01	Rice	nucleus	43.96	43.83
TraesCS2A01G566200.1	Wheat	nucleus	41.18	43.61
Zm00001d002934_P001	Maize	nucleus	44.27	43.6
TraesCS2A01G566100.1	Wheat	nucleus	43.03	43.57
TraesCS2D01G576200.1	Wheat	nucleus	42.72	43.53
HORVU2Hr1G126080.3	Barley	nucleus	43.03	43.44
TraesCS2D01G576500.2	Wheat	nucleus	42.41	43.35
TraesCS2B01G627200.1	Wheat	nucleus	42.11	42.9
EES13158	Sorghum	nucleus	43.96	42.64
TraesCS7B01G226600.1	Wheat	nucleus	40.87	42.31
TraesCS7D01G322700.1	Wheat	nucleus	40.87	42.31
TraesCS7A01G326000.1	Wheat	nucleus	40.56	41.99
EES14359	Sorghum	nucleus	43.34	41.79
HORVU2Hr1G126040.14	Barley	nucleus	39.94	40.44
TraesCS2A01G566300.1	Wheat	nucleus	40.25	40.12
Bra017750.1-P	Field mustard	nucleus	44.58	38.92
Bra011667.1-P	Field mustard	nucleus	44.58	38.81
Bra026981.1-P	Field mustard	nucleus	39.94	37.94
Bra010183.1-P	Field mustard	nucleus	35.91	37.66
Bra007640.1-P	Field mustard	cytosol, nucleus, plastid	37.15	37.27
Os04t0691300-00	Rice	cytosol, nucleus	32.82	37.06
Bra004509.1-P	Field mustard	nucleus	39.63	35.65
Bra003478.1-P	Field mustard	nucleus	36.84	35.42
Bra035896.1-P	Field mustard	nucleus	36.22	35.24
Bra010077.1-P	Field mustard	nucleus	37.46	34.87
Bra019750.1-P	Field mustard	nucleus	41.8	34.35
Bra016783.1-P	Field mustard	nucleus	41.18	34.28
Bra029266.1-P	Field mustard	nucleus	38.39	34.07
Bra040486.1-P	Field mustard	nucleus	37.77	33.52
Bra035127.1-P	Field mustard	nucleus	37.15	33.43
Bra008423.1-P	Field mustard	nucleus	35.91	33.24
Bra027024.1-P	Field mustard	nucleus	40.25	33.16
Bra023288.1-P	Field mustard	nucleus	37.15	32.97
Bra003602.1-P	Field mustard	nucleus	35.6	32.21
Bra000709.1-P	Field mustard	nucleus	33.75	31.96
Bra037914.1-P	Field mustard	nucleus	33.75	31.87
Bra029264.1-P	Field mustard	nucleus	26.63	28.29

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra016098	EnsemblPlants:Bra016098.1	EnsemblPlants:Bra016098.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4DHX1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF41	SUPFAM:SSF101941
UniParc:UPI0002541B61	SEG:seg	:	:	:	:

Description

AT1G71930 (E=4e-151) VND7, ANAC030 | VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7); transcription activator/ transcription factor/ transcription regulator

Coordinates

chrA07:+:19425760..19427278

Molecular Weight (calculated)

37286.3 Da

IEP (calculated)

6.320

GRAVY (calculated)

-0.873

Length

323 amino acids

Sequence
(BLAST)

001: MDNIMHMPPG FRFHPTEEEL VGYYLDRKIN SMKSALDVIV EIDLYKMEPW DIQARCTLGY EEQNEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV
101: LSKNSVIGMR KTLVYYKGRA PNGRKSDWIM HEYRLQNSEL APVQEEGWVV CRAFRKPIPN QRPLGYEPWQ NQLYHVDSSN NYSSSATMNS SHHIGASSSS
201: HNLNQMLMNH YNGNNVSSSM HQYGNIELPQ LDSPSLSPSL GTNKDQNEGF EQEEEKSFNY VDWRTLDSLL ETQVTHPQNP NALMSSFETQ SYNPAQNFPS
301: MHQNYSHEVE TNIRDSLGCF PDS

Best Arabidopsis Sequence Match ( AT1G71930.2 )
(BLAST)

001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS

Arabidopsis Description

NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.