Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P23170_001 | Banana | nucleus | 57.2 | 59.04 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 52.92 | 45.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.86 | 41.18 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 49.81 | 40.89 |
| GSMUA_Achr11P... | Banana | nucleus | 50.19 | 40.69 |
| GSMUA_Achr2P20020_001 | Banana | cytosol, nucleus, plastid | 44.75 | 40.49 |
| Solyc11g018660.1.1 | Tomato | nucleus | 48.25 | 39.87 |
| Bra016098.1-P | Field mustard | nucleus | 49.81 | 39.63 |
| AT1G71930.2 | Thale cress | nucleus | 49.81 | 39.51 |
| Solyc06g065410.2.1 | Tomato | nucleus | 49.42 | 39.44 |
| CDX96362 | Canola | nucleus | 49.81 | 39.38 |
| PGSC0003DMT400002318 | Potato | nucleus | 48.25 | 39.24 |
| CDX82202 | Canola | nucleus | 49.81 | 39.14 |
| CDX72846 | Canola | nucleus | 49.42 | 39.08 |
| PGSC0003DMT400067086 | Potato | nucleus | 49.42 | 38.6 |
| CDY03671 | Canola | nucleus | 49.03 | 38.53 |
| Bra007996.1-P | Field mustard | nucleus | 49.03 | 38.53 |
| GSMUA_Achr10P... | Banana | nucleus | 42.8 | 38.19 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 46.69 | 37.74 |
| GSMUA_Achr11P... | Banana | nucleus | 48.64 | 37.43 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 48.25 | 37.35 |
| GSMUA_Achr10P... | Banana | nucleus | 44.36 | 36.77 |
| KRG91808 | Soybean | nucleus | 48.64 | 36.66 |
| GSMUA_Achr3P03500_001 | Banana | nucleus | 30.74 | 36.41 |
| KRH34977 | Soybean | nucleus | 48.64 | 36.13 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 47.47 | 35.88 |
| GSMUA_Achr7P05980_001 | Banana | nucleus | 47.47 | 35.06 |
| GSMUA_Achr11P... | Banana | nucleus | 47.86 | 34.94 |
| GSMUA_Achr3P12230_001 | Banana | nucleus | 45.53 | 34.51 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 49.42 | 34.42 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 41.63 | 33.54 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 45.14 | 33.05 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 40.86 | 32.81 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G18860_001 |
| EnsemblPlants:GSMUA_Achr6P18860_001 | EnsemblPlants:GSMUA_Achr6T18860_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0T884 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF41 | SUPFAM:SSF101941 |
| UniParc:UPI0002960458 | : | : | : | : | : |
Description
NAC domain protein, IPR003441 [Source:GMGC_GENE;Acc:GSMUA_Achr6G18860_001]
Coordinates
chr6:+:13045291..13046243
Molecular Weight (calculated)
28994.2 Da
IEP (calculated)
8.359
GRAVY (calculated)
-0.577
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVDSCVPP GFRFHPTEEE LVGYYLGTKV ASQKIDLVVI KDVDLYGIEP WDLQVSCRHG HDEQREWYLF SHKDRKYPSG TRTNRATAAG FWKAMGRDKP
101: VISSSRVIGL RKTLVFDKGR APNGRKTDWL MHEYRLQSSE LASSQAKGWV VCRAFQKPTP TQRPCASNVS ATYNNSLETT VSMRGNFCDE RAVGYSIIPR
201: AEILEGDVVG SDETSAGKKR SNRNEHMMDW KVLDKLLSLS QSNESSTACF LPQFDSS
101: VISSSRVIGL RKTLVFDKGR APNGRKTDWL MHEYRLQSSE LASSQAKGWV VCRAFQKPTP TQRPCASNVS ATYNNSLETT VSMRGNFCDE RAVGYSIIPR
201: AEILEGDVVG SDETSAGKKR SNRNEHMMDW KVLDKLLSLS QSNESSTACF LPQFDSS
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.