Factsheet for GSMUA_Achr8P11590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr6P36840_001
GSMUA_Achr7P06640_001
GSMUA_Achr8P11590_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr6P36840_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr7P06640_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr8P11590_001	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	38.05	81.76
GSMUA_Achr11P...	Banana	nucleus	72.01	65.06
GSMUA_Achr11P...	Banana	nucleus	61.01	61.2
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	62.89	55.71
GSMUA_Achr7P06640_001	Banana	nucleus	58.18	54.41
KRH23801	Soybean	nucleus	58.18	53.31
KRH39986	Soybean	nucleus	58.18	52.26
KRH62610	Soybean	nucleus	55.66	51.91
Solyc06g034340.1.1	Tomato	nucleus	55.35	51.76
KRH56355	Soybean	nucleus	57.55	50.41
Solyc03g083880.2.1	Tomato	nucleus	49.06	50.0
GSMUA_Achr6P36840_001	Banana	nucleus	57.23	49.32
GSMUA_AchrUn_...	Banana	nucleus	38.68	48.24
CDY00280	Canola	nucleus	38.36	46.92
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	37.74	46.69
GSMUA_Achr8P12100_001	Banana	nucleus	48.43	46.39
GSMUA_Achr11P...	Banana	nucleus	48.43	46.11
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	40.25	45.07
GSMUA_Achr7P23170_001	Banana	nucleus	35.22	44.98
GSMUA_Achr3P22360_001	Banana	nucleus	41.82	44.04
GSMUA_Achr10P...	Banana	nucleus	38.99	43.06
GSMUA_Achr10P...	Banana	nucleus	41.2	42.26
GSMUA_Achr3P12230_001	Banana	nucleus	44.97	42.18
CDY16776	Canola	nucleus	43.71	41.87
Bra035896.1-P	Field mustard	nucleus	43.4	41.57
CDX87246	Canola	nucleus	43.4	41.07
Bra010077.1-P	Field mustard	nucleus	44.65	40.92
AT5G62380.1	Thale cress	nucleus	44.65	40.8
CDY58006	Canola	nucleus	44.03	40.23
CDY30716	Canola	nucleus	44.97	39.61
Bra029266.1-P	Field mustard	nucleus	44.97	39.29
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	38.99	38.75
GSMUA_Achr3P03500_001	Banana	nucleus	26.1	38.25
GSMUA_Achr7P05980_001	Banana	nucleus	41.82	38.22
GSMUA_Achr9P24450_001	Banana	nucleus	41.2	37.32
GSMUA_Achr6P28890_001	Banana	nucleus	37.42	37.3
Bra029264.1-P	Field mustard	nucleus	29.56	30.92
CDY00281	Canola	cytosol	5.03	23.88

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G11590_001
EnsemblPlants:GSMUA_Achr8P11590_001	EnsemblPlants:GSMUA_Achr8T11590_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TPL2	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941
UniParc:UPI000295E30E	SEG:seg	:	:	:	:

Description

Putative NAC domain-containing protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11590_001]

Coordinates

chr8:-:8368654..8369874

Molecular Weight (calculated)

36410.3 Da

IEP (calculated)

8.573

GRAVY (calculated)

-0.586

Length

318 amino acids

Sequence
(BLAST)

001: MILQAAAIQS PGKMDTLSHV PPGFRFHPTD EELVDYYLRK KVASRRIDLD IIKDIDLYKI EPWDLQVKCK IGTEEQNEWY FFSHKDKKYP TGTRTNRATT
101: AGFWKATGRD KPIYSKNSLI GMRKTLVFYR GRAPNGQKSD WIMHEYRLEA NENAPPQAKG WVVCRVFIKR IAPVIRRAIG APPEMAYHHH HPLFSCKPEL
201: EVRHHHLPQF DSFLQLPQLE SPNLPFSLVA QEDPMIQPSK QLQIFSTCNN SQGIIHHAAE QATDWRVFDK FVASQLSHGD VCRELNCSSS GSDFQKLEAN
301: VEHASASNSS GGQTELWK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.