Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16776 | Canola | nucleus | 93.45 | 94.58 |
| CDY00280 | Canola | nucleus | 66.37 | 85.77 |
| AT5G62380.1 | Thale cress | nucleus | 84.82 | 81.9 |
| CDY58006 | Canola | nucleus | 83.93 | 81.03 |
| CDY30716 | Canola | nucleus | 83.04 | 77.29 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 33.04 | 75.0 |
| Os04t0536500-01 | Rice | cytosol | 33.33 | 69.14 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 31.85 | 67.3 |
| Zm00001d051294_P001 | Maize | cytosol | 34.82 | 66.86 |
| Zm00001d045600_P001 | Maize | nucleus | 27.08 | 65.47 |
| CDY72666 | Canola | nucleus | 29.17 | 60.12 |
| CDY00281 | Canola | cytosol | 11.31 | 56.72 |
| CDY70728 | Canola | nucleus | 29.46 | 55.31 |
| CDY35029 | Canola | cytosol | 31.85 | 51.44 |
| Solyc03g083880.2.1 | Tomato | nucleus | 44.64 | 48.08 |
| KRH62610 | Soybean | nucleus | 46.73 | 46.04 |
| Zm00001d017396_P001 | Maize | nucleus | 29.17 | 46.01 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 45.83 | 45.83 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 45.83 | 45.83 |
| OQU82026 | Sorghum | nucleus | 46.13 | 45.59 |
| CDX98078 | Canola | nucleus | 45.83 | 45.56 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 45.54 | 45.54 |
| CDY15987 | Canola | nucleus | 45.54 | 45.13 |
| OQU75680 | Sorghum | nucleus | 45.54 | 45.13 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 45.54 | 45.0 |
| CDY26551 | Canola | nucleus | 45.54 | 45.0 |
| CDY62781 | Canola | nucleus | 21.13 | 44.94 |
| KRH23801 | Soybean | nucleus | 45.83 | 44.38 |
| CDY21041 | Canola | nucleus | 46.13 | 43.91 |
| GSMUA_Achr11P... | Banana | nucleus | 41.37 | 43.85 |
| KRH56355 | Soybean | nucleus | 47.32 | 43.8 |
| CDY47055 | Canola | nucleus | 42.56 | 43.73 |
| Zm00001d002828_P001 | Maize | cytosol | 44.64 | 43.6 |
| CDY45221 | Canola | nucleus | 38.1 | 43.54 |
| KXG31125 | Sorghum | nucleus | 44.94 | 43.52 |
| KRH39986 | Soybean | nucleus | 45.83 | 43.5 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 46.43 | 43.45 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 41.07 | 43.4 |
| CDY30778 | Canola | nucleus | 38.1 | 43.39 |
| CDY31249 | Canola | nucleus | 46.43 | 42.74 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 44.35 | 42.69 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 44.64 | 42.61 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 44.64 | 42.61 |
| CDX72580 | Canola | nucleus | 42.56 | 42.18 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 44.64 | 42.13 |
| CDY46914 | Canola | nucleus | 45.24 | 42.11 |
| GSMUA_Achr11P... | Banana | nucleus | 44.05 | 42.05 |
| CDY31835 | Canola | nucleus | 44.94 | 41.83 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 41.96 | 41.59 |
| CDX69208 | Canola | nucleus | 42.26 | 41.4 |
| CDX75558 | Canola | nucleus | 42.26 | 41.4 |
| Os02t0643600-00 | Rice | nucleus | 45.54 | 41.35 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 41.67 | 41.3 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 41.67 | 41.3 |
| Os06t0104200-01 | Rice | nucleus | 44.64 | 41.21 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 41.37 | 41.0 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 44.94 | 39.63 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 43.45 | 39.57 |
| CDY30057 | Canola | nucleus | 45.54 | 38.83 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 36.61 | 38.2 |
| CDY38177 | Canola | nucleus | 40.48 | 37.67 |
| CDX82202 | Canola | nucleus | 36.61 | 37.61 |
| CDY26917 | Canola | nucleus | 34.23 | 37.34 |
| CDY03671 | Canola | nucleus | 36.31 | 37.31 |
| CDX72846 | Canola | nucleus | 36.01 | 37.23 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 36.01 | 37.12 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 36.61 | 37.05 |
| CDX96362 | Canola | nucleus | 35.71 | 36.92 |
| CDX67870 | Canola | nucleus | 36.31 | 36.31 |
| CDY27524 | Canola | nucleus | 39.29 | 36.26 |
| CDY41554 | Canola | nucleus | 37.8 | 35.57 |
| CDX73267 | Canola | cytosol | 33.93 | 35.08 |
| CDX80045 | Canola | nucleus | 37.2 | 34.82 |
| CDX90756 | Canola | nucleus | 33.93 | 34.34 |
| CDY05099 | Canola | nucleus | 33.93 | 34.23 |
| CDX93819 | Canola | nucleus | 35.42 | 32.69 |
| CDY01243 | Canola | nucleus | 35.71 | 32.34 |
| CDY22285 | Canola | nucleus | 33.04 | 31.99 |
| CDX87372 | Canola | nucleus | 33.33 | 31.11 |
| CDX88550 | Canola | nucleus | 33.33 | 30.85 |
| CDY70056 | Canola | nucleus | 32.44 | 30.53 |
| CDY71976 | Canola | nucleus | 31.55 | 30.37 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DD96 | EnsemblPlants:CDX87246 | ProteinID:CDX87246 | ProteinID:CDX87246.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00146186001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | UniParc:UPI0004EED5FB | SEG:seg | : | : |
Description
BnaC09g05610D
Coordinates
chrLK031849:+:1399316..1400492
Molecular Weight (calculated)
38910.0 Da
IEP (calculated)
5.499
GRAVY (calculated)
-0.987
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLSHIPPG YRFHPTDEEL VDYYLKNKVA FPEMQVDVIK DVDLYKIEPW DIQELCGRGA GEKREWYFFS YKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT INNNNPRTMM GSSSRQDSNW FRQQMEVANG NYYHLPDLEG
201: PIMFQGSSSS SLHDNDNDHY GVVLSNINAA PSTLMQRDDE GDHGHIITND DAHMTMMNTN TDHHHHHQPE LLLNDDHNDQ LMDWQTLDKL VASQLILSQE
301: EEEVKQDPPS NNVSNETYNH ISEEKPSFSW AQNTHT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT INNNNPRTMM GSSSRQDSNW FRQQMEVANG NYYHLPDLEG
201: PIMFQGSSSS SLHDNDNDHY GVVLSNINAA PSTLMQRDDE GDHGHIITND DAHMTMMNTN TDHHHHHQPE LLLNDDHNDQ LMDWQTLDKL VASQLILSQE
301: EEEVKQDPPS NNVSNETYNH ISEEKPSFSW AQNTHT
001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
Arabidopsis Description
NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.