Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96362 | Canola | nucleus | 98.15 | 98.15 |
| Bra016098.1-P | Field mustard | nucleus | 97.23 | 97.83 |
| AT1G71930.2 | Thale cress | nucleus | 92.0 | 92.28 |
| CDY03671 | Canola | nucleus | 87.38 | 86.85 |
| CDX82202 | Canola | nucleus | 87.38 | 86.85 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 32.92 | 67.3 |
| CDY72666 | Canola | nucleus | 29.23 | 58.28 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 35.38 | 56.93 |
| CDY70728 | Canola | nucleus | 30.46 | 55.31 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 53.23 | 55.27 |
| Solyc06g065410.2.1 | Tomato | nucleus | 52.92 | 53.42 |
| PGSC0003DMT400067086 | Potato | nucleus | 53.85 | 53.19 |
| PGSC0003DMT400002318 | Potato | nucleus | 51.69 | 53.16 |
| Solyc11g018660.1.1 | Tomato | nucleus | 50.77 | 53.05 |
| KRG91808 | Soybean | nucleus | 53.23 | 50.73 |
| KRH34977 | Soybean | nucleus | 53.85 | 50.58 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 39.08 | 49.42 |
| CDY35029 | Canola | cytosol | 31.38 | 49.04 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 41.23 | 47.86 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 44.31 | 47.68 |
| Zm00001d034984_P001 | Maize | nucleus | 40.31 | 47.29 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 36.0 | 46.99 |
| TraesCS2B01G627000.1 | Wheat | nucleus | 42.15 | 45.67 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 41.85 | 45.64 |
| TraesCS2D01G576400.1 | Wheat | nucleus | 42.77 | 45.57 |
| CDY62781 | Canola | nucleus | 22.15 | 45.57 |
| CDY45221 | Canola | nucleus | 40.31 | 44.56 |
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 43.08 | 44.44 |
| Zm00001d050039_P001 | Maize | nucleus | 40.31 | 44.41 |
| CDY30778 | Canola | nucleus | 40.31 | 44.41 |
| TraesCS2B01G627100.1 | Wheat | nucleus | 42.77 | 44.27 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 41.23 | 43.93 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 43.08 | 43.89 |
| TraesCS2D01G576200.1 | Wheat | nucleus | 42.77 | 43.85 |
| Os08t0103900-01 | Rice | nucleus | 43.69 | 43.83 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 43.08 | 43.75 |
| TraesCS2D01G576500.2 | Wheat | nucleus | 42.46 | 43.67 |
| Zm00001d002934_P001 | Maize | nucleus | 44.0 | 43.6 |
| CDY00280 | Canola | nucleus | 34.77 | 43.46 |
| TraesCS2B01G627200.1 | Wheat | nucleus | 42.15 | 43.22 |
| EES13158 | Sorghum | nucleus | 44.0 | 42.94 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 40.92 | 42.63 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 40.92 | 42.63 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 40.62 | 42.31 |
| EES14359 | Sorghum | nucleus | 42.77 | 41.49 |
| CDY47055 | Canola | nucleus | 41.23 | 40.98 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 40.0 | 40.75 |
| CDY38177 | Canola | nucleus | 44.92 | 40.44 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 40.0 | 40.12 |
| CDX72580 | Canola | nucleus | 41.85 | 40.12 |
| CDX69208 | Canola | nucleus | 41.85 | 39.65 |
| CDX75558 | Canola | nucleus | 41.85 | 39.65 |
| CDY15987 | Canola | nucleus | 40.0 | 38.35 |
| CDY21041 | Canola | nucleus | 41.54 | 38.24 |
| CDX98078 | Canola | nucleus | 39.69 | 38.17 |
| CDY26917 | Canola | nucleus | 36.0 | 37.99 |
| CDY26551 | Canola | nucleus | 39.69 | 37.94 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 32.62 | 37.06 |
| CDY31249 | Canola | nucleus | 41.54 | 36.99 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 36.62 | 36.96 |
| CDY46914 | Canola | nucleus | 40.92 | 36.84 |
| CDY31835 | Canola | nucleus | 40.92 | 36.84 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 36.31 | 36.2 |
| CDY41554 | Canola | nucleus | 39.69 | 36.13 |
| CDX87246 | Canola | nucleus | 37.23 | 36.01 |
| CDX80045 | Canola | nucleus | 39.69 | 35.93 |
| CDY16776 | Canola | nucleus | 36.62 | 35.84 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 36.62 | 35.84 |
| CDX73267 | Canola | cytosol | 35.69 | 35.69 |
| CDX67870 | Canola | nucleus | 36.31 | 35.12 |
| CDY30716 | Canola | nucleus | 38.77 | 34.9 |
| CDY30057 | Canola | nucleus | 42.15 | 34.77 |
| CDY58006 | Canola | nucleus | 37.23 | 34.77 |
| CDY22285 | Canola | nucleus | 36.31 | 34.01 |
| CDY27524 | Canola | nucleus | 37.85 | 33.79 |
| CDX87372 | Canola | nucleus | 37.23 | 33.61 |
| CDY71976 | Canola | nucleus | 36.0 | 33.52 |
| CDX88550 | Canola | nucleus | 37.23 | 33.33 |
| CDX93819 | Canola | nucleus | 37.23 | 33.24 |
| CDX90756 | Canola | nucleus | 33.85 | 33.13 |
| CDY70056 | Canola | nucleus | 36.31 | 33.05 |
| CDY05099 | Canola | nucleus | 33.85 | 33.03 |
| CDY01243 | Canola | nucleus | 37.54 | 32.88 |
| CDY00281 | Canola | cytosol | 2.15 | 10.45 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078C6W3 | EnsemblPlants:CDX72846 | ProteinID:CDX72846 | ProteinID:CDX72846.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00103244001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF41 | SUPFAM:SSF101941 | UniParc:UPI0004EB3D70 | SEG:seg | : | : |
Description
BnaC06g32940D
Coordinates
chrLK031797:+:645043..646834
Molecular Weight (calculated)
37350.3 Da
IEP (calculated)
6.390
GRAVY (calculated)
-0.841
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNIMHMPPG FRFHPTEEEL VGYYLDRKIN SMKSALDVIV EIDLYKMEPW DIQARCTLGY EEQNEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV
101: LSKNNVIGMR KTLVYYKGRA PNGRKSDWIM HEYRLQNSEV APVQEEGWVV CRAFRKPIPN QRPLGYEPWQ NQLYHVDSSN NYSSSATMNS SHHIGASSSS
201: HNLSQMLMSN NHYNGNNVSS SMHQYANIAL PQLDSPSLSP SLGTNKDQNE GFEQEEEKSF NCVDWRTLDS LLETQVTHPQ NPNALMSSFE TQSYNPAQNF
301: PSMHQNYSHE VETNIHDSLG CFPDS
101: LSKNNVIGMR KTLVYYKGRA PNGRKSDWIM HEYRLQNSEV APVQEEGWVV CRAFRKPIPN QRPLGYEPWQ NQLYHVDSSN NYSSSATMNS SHHIGASSSS
201: HNLSQMLMSN NHYNGNNVSS SMHQYANIAL PQLDSPSLSP SLGTNKDQNE GFEQEEEKSF NCVDWRTLDS LLETQVTHPQ NPNALMSSFE TQSYNPAQNF
301: PSMHQNYSHE VETNIHDSLG CFPDS
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.