CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX87246
CDY00280
CDY00281
CDY16776
CDY30716
CDY58006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	CDX87246	AT5G62380.1	18445131
AT5G62380.1	CDY00280	AT5G62380.1	18445131
AT5G62380.1	CDY00281	AT5G62380.1	18445131
AT5G62380.1	CDY16776	AT5G62380.1	18445131
AT5G62380.1	CDY30716	AT5G62380.1	18445131
AT5G62380.1	CDY58006	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58006	Canola	nucleus	97.01	18.68
AT5G62380.1	Thale cress	nucleus	92.54	17.82
Bra029266.1-P	Field mustard	nucleus	85.07	15.66
CDY30716	Canola	nucleus	83.58	15.51
CDY16776	Canola	nucleus	59.7	12.05
CDX87246	Canola	nucleus	56.72	11.31
CDX98078	Canola	nucleus	29.85	5.92
CDY15987	Canola	nucleus	29.85	5.9
GSMUA_Achr7P06640_001	Banana	nucleus	29.85	5.88
CDY21041	Canola	nucleus	29.85	5.67
CDY26551	Canola	nucleus	28.36	5.59
KRH62610	Soybean	nucleus	28.36	5.57
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	29.85	5.57
CDY31249	Canola	nucleus	29.85	5.48
Solyc03g083880.2.1	Tomato	nucleus	25.37	5.45
TraesCS7A01G008800.1	Wheat	nucleus	26.87	5.36
TraesCS4A01G486200.1	Wheat	nucleus	26.87	5.36
TraesCS7D01G008500.1	Wheat	nucleus	26.87	5.36
CDY31835	Canola	nucleus	28.36	5.26
CDY46914	Canola	nucleus	28.36	5.26
KRH56355	Soybean	nucleus	28.36	5.23
HORVU7Hr1G000140.6	Barley	nucleus	26.87	5.16
GSMUA_Achr6P36840_001	Banana	nucleus	28.36	5.15
KRH39986	Soybean	nucleus	26.87	5.08
GSMUA_Achr8P11590_001	Banana	cytosol	23.88	5.03
OQU75680	Sorghum	nucleus	25.37	5.01
OQU82026	Sorghum	nucleus	25.37	5.0
KRH23801	Soybean	nucleus	25.37	4.9
GSMUA_Achr11P...	Banana	nucleus	25.37	4.83
TraesCS6A01G237900.1	Wheat	nucleus	25.37	4.83
TraesCS6D01G220600.1	Wheat	nucleus	25.37	4.83
CDY30057	Canola	nucleus	28.36	4.82
GSMUA_Achr11P...	Banana	nucleus	22.39	4.73
Os06t0104200-01	Rice	nucleus	25.37	4.67
KXG31125	Sorghum	nucleus	23.88	4.61
HORVU6Hr1G060800.3	Barley	nucleus	23.88	4.49
TraesCS6B01G286200.1	Wheat	cytosol	23.88	4.2
Zm00001d002828_P001	Maize	cytosol	20.9	4.07
Os02t0643600-00	Rice	nucleus	22.39	4.05
CDY45221	Canola	nucleus	16.42	3.74
CDY47055	Canola	nucleus	17.91	3.67
TraesCS2D01G382800.1	Wheat	cytosol, nucleus, peroxisome	17.91	3.54
TraesCS2A01G386300.1	Wheat	cytosol, nucleus, peroxisome	17.91	3.54
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	17.91	3.54
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	17.91	3.54
CDY30778	Canola	nucleus	14.93	3.39
CDY38177	Canola	nucleus	17.91	3.32
CDX72580	Canola	nucleus	16.42	3.24
CDX69208	Canola	nucleus	16.42	3.21
CDY27524	Canola	nucleus	16.42	3.02
CDX67870	Canola	nucleus	14.93	2.98
CDX75558	Canola	nucleus	14.93	2.92
CDY41554	Canola	nucleus	14.93	2.8
CDY11382	Canola	cytosol, nucleus, plastid	13.43	2.8
CDX80045	Canola	nucleus	14.93	2.79
CDY25087	Canola	cytosol, nucleus, peroxisome	13.43	2.76
CDX76597	Canola	cytosol, nucleus, peroxisome	13.43	2.71
CDY26917	Canola	nucleus	11.94	2.6
CDX73267	Canola	cytosol	11.94	2.46
CDX90756	Canola	nucleus	11.94	2.41
CDY05099	Canola	nucleus	11.94	2.4
CDY22285	Canola	nucleus	11.94	2.31
CDX93819	Canola	nucleus	11.94	2.2
CDY01243	Canola	nucleus	11.94	2.16
CDX96362	Canola	nucleus	10.45	2.15
CDX72846	Canola	nucleus	10.45	2.15
CDY71976	Canola	nucleus	10.45	2.01
CDY03671	Canola	nucleus	8.96	1.83
CDX82202	Canola	nucleus	8.96	1.83
CDY70056	Canola	nucleus	8.96	1.68
CDX87372	Canola	nucleus	8.96	1.67
CDX88550	Canola	nucleus	8.96	1.65
CDY62781	Canola	nucleus	2.99	1.27
Zm00001d045600_P001	Maize	nucleus	1.49	0.72
Zm00001d051294_P001	Maize	cytosol	1.49	0.57
CDY00280	Canola	nucleus	1.49	0.38
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	0.0	0.0
Os04t0536500-01	Rice	cytosol	0.0	0.0
CDY72666	Canola	nucleus	0.0	0.0
CDY70728	Canola	nucleus	0.0	0.0
CDY35029	Canola	cytosol	0.0	0.0
CDX69209	Canola	cytosol, mitochondrion, nucleus	0.0	0.0
Zm00001d017396_P001	Maize	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY00281	EnsemblPlantsGene:GSBRNA2T00109855001	ProteinID:CDY00281	ProteinID:CDY00281.1	SEG:seg	UniParc:UPI0004EEC96B
MapMan:35.1	:	:	:	:	:

Description

BnaA06g21820D

Coordinates

chrLK031917:+:742443..742646

Molecular Weight (calculated)

7626.6 Da

IEP (calculated)

3.975

GRAVY (calculated)

-0.861

Length

67 amino acids

Sequence
(BLAST)

1: MDWQTLDKFV ASQLIMSQED EEVNKDPSDN SSETFHHLSE EQATMVSMNA SPSSPCSFYS WSQNTHP

Best Arabidopsis Sequence Match ( AT5G62380.1 )
(BLAST)

001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT

Arabidopsis Description

NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.