Factsheet for GSMUA_Achr11P03780_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr6P36840_001
GSMUA_Achr7P06640_001
GSMUA_Achr8P11590_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr6P36840_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr7P06640_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr8P11590_001	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	36.28	77.7
GSMUA_Achr11P...	Banana	nucleus	69.4	62.5
GSMUA_Achr8P11590_001	Banana	cytosol	61.2	61.01
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	65.3	57.66
KRH23801	Soybean	nucleus	62.78	57.35
KRH39986	Soybean	nucleus	63.41	56.78
KRH62610	Soybean	nucleus	58.99	54.84
GSMUA_Achr7P06640_001	Banana	nucleus	57.41	53.53
KRH56355	Soybean	nucleus	59.94	52.34
Solyc03g083880.2.1	Tomato	nucleus	49.84	50.64
Solyc06g034340.1.1	Tomato	nucleus	54.26	50.59
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	40.69	50.19
GSMUA_Achr6P36840_001	Banana	nucleus	56.15	48.24
GSMUA_Achr8P12100_001	Banana	nucleus	49.53	47.29
GSMUA_AchrUn_...	Banana	nucleus	37.54	46.67
CDY00280	Canola	nucleus	38.17	46.54
GSMUA_Achr11P...	Banana	nucleus	48.27	45.81
GSMUA_Achr7P23170_001	Banana	nucleus	35.02	44.58
GSMUA_Achr3P22360_001	Banana	nucleus	42.27	44.37
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	39.43	44.01
GSMUA_Achr10P...	Banana	nucleus	41.32	42.26
AT5G62380.1	Thale cress	nucleus	46.37	42.24
GSMUA_Achr10P...	Banana	nucleus	38.17	42.01
CDY16776	Canola	nucleus	43.53	41.57
Bra010077.1-P	Field mustard	nucleus	45.43	41.5
CDY58006	Canola	nucleus	45.43	41.38
CDX87246	Canola	nucleus	43.85	41.37
GSMUA_Achr3P12230_001	Banana	nucleus	44.16	41.3
Bra035896.1-P	Field mustard	nucleus	43.22	41.27
CDY30716	Canola	nucleus	46.06	40.44
GSMUA_Achr7P05980_001	Banana	nucleus	44.16	40.23
Bra029266.1-P	Field mustard	nucleus	45.74	39.84
GSMUA_Achr3P03500_001	Banana	nucleus	25.87	37.79
GSMUA_Achr6P28890_001	Banana	nucleus	37.85	37.62
GSMUA_Achr9P24450_001	Banana	nucleus	41.64	37.61
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	36.91	36.56
Bra029264.1-P	Field mustard	nucleus	30.91	32.24
CDY00281	Canola	cytosol	4.73	22.39

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G03780_001
EnsemblPlants:GSMUA_Achr11P03780_001	EnsemblPlants:GSMUA_Achr11T03780_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0RP58	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941
UniParc:UPI0002962C76	SEG:seg	:	:	:	:

Description

Putative NAC domain-containing protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr11G03780_001]

Coordinates

chr11:+:2726376..2727470

Molecular Weight (calculated)

35955.4 Da

IEP (calculated)

7.356

GRAVY (calculated)

-0.598

Length

317 amino acids

Sequence
(BLAST)

001: MDTFSHVPPG FRFHPTEEEL VDYYLKKKVA SRGIDLDIIK DVDLYKIEPW DLQGIYRLHQ QCISLEEQNE WYFFSHKDKK YPTGTRTNRA TAAGFWKATG
101: RDKPIYSKNS LIGMRKTLVF YKGRAPNGQK SDWIMHEYRL ESNESAPLQA SDKGWVVCRV FKKRMTATPI GRASGHDSAC WYDDHASLVP ELDSPRQAGA
201: RPGMAFLQLP QLESPKLPFD VGHAAALHPP AITQDDLMQY SNKQLQVFST YNIAGATDHS VEQVTDWRVL DKFVASQLSH DGGVCKELHC STSEKPEVNA
301: ERASTSNCSA AQIELWK

Best Arabidopsis Sequence Match ( AT1G12260.2 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.