Factsheet for GSMUA_Achr11P17510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr6P36840_001
GSMUA_Achr7P06640_001
GSMUA_Achr8P11590_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr6P36840_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr7P06640_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr8P11590_001	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	34.94	83.11
Os04t0536500-01	Rice	cytosol	37.78	82.1
Zm00001d051294_P001	Maize	cytosol	37.5	75.43
GSMUA_Achr8P11590_001	Banana	cytosol	65.06	72.01
GSMUA_Achr11P...	Banana	nucleus	62.5	69.4
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	64.2	62.95
KRH23801	Soybean	nucleus	61.93	62.82
OQU82026	Sorghum	nucleus	60.23	62.35
Zm00001d002828_P001	Maize	cytosol	60.8	62.21
KRH62610	Soybean	nucleus	60.23	62.17
Zm00001d017396_P001	Maize	nucleus	37.5	61.97
KRH39986	Soybean	nucleus	62.22	61.86
GSMUA_Achr7P06640_001	Banana	nucleus	59.38	61.47
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	58.81	61.06
TraesCS2A01G386300.1	Wheat	cytosol, nucleus, peroxisome	58.52	60.77
TraesCS2D01G382800.1	Wheat	cytosol, nucleus, peroxisome	58.24	60.47
KXG31125	Sorghum	nucleus	59.38	60.23
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	57.95	60.18
TraesCS6D01G220600.1	Wheat	nucleus	59.09	59.09
TraesCS6A01G237900.1	Wheat	nucleus	59.09	59.09
HORVU6Hr1G060800.3	Barley	nucleus	59.66	58.99
KRH56355	Soybean	nucleus	60.51	58.68
Solyc06g034340.1.1	Tomato	nucleus	56.25	58.24
Os02t0643600-00	Rice	nucleus	60.8	57.84
Solyc03g083880.2.1	Tomato	nucleus	50.57	57.05
TraesCS6B01G286200.1	Wheat	cytosol	61.36	56.69
GSMUA_Achr6P36840_001	Banana	nucleus	56.82	54.2
GSMUA_Achr8P12100_001	Banana	nucleus	47.44	50.3
GSMUA_AchrUn_...	Banana	nucleus	36.36	50.2
CDY00280	Canola	nucleus	36.93	50.0
GSMUA_Achr11P...	Banana	nucleus	46.31	48.8
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	34.94	47.86
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	38.35	47.54
GSMUA_Achr7P23170_001	Banana	nucleus	32.1	45.38
CDY16776	Canola	nucleus	42.61	45.18
Bra035896.1-P	Field mustard	nucleus	42.33	44.88
AT5G62380.1	Thale cress	nucleus	44.32	44.83
GSMUA_Achr3P22360_001	Banana	nucleus	38.35	44.7
Bra010077.1-P	Field mustard	nucleus	43.75	44.38
CDX87246	Canola	nucleus	42.05	44.05
GSMUA_Achr10P...	Banana	nucleus	38.64	43.87
GSMUA_Achr10P...	Banana	nucleus	35.8	43.75
GSMUA_Achr3P12230_001	Banana	nucleus	42.05	43.66
CDY58006	Canola	nucleus	42.9	43.39
CDY30716	Canola	nucleus	44.03	42.94
Bra029266.1-P	Field mustard	nucleus	44.03	42.58
GSMUA_Achr7P05980_001	Banana	nucleus	40.91	41.38
GSMUA_Achr3P03500_001	Banana	nucleus	25.28	41.01
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	36.65	40.31
GSMUA_Achr9P24450_001	Banana	nucleus	39.49	39.6
GSMUA_Achr6P28890_001	Banana	nucleus	34.94	38.56
Bra029264.1-P	Field mustard	nucleus	30.11	34.87
CDY00281	Canola	cytosol	4.83	25.37

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G17510_001
EnsemblPlants:GSMUA_Achr11P17510_001	EnsemblPlants:GSMUA_Achr11T17510_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0RT31	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941
UniParc:UPI000295D1A0	SEG:seg	:	:	:	:

Description

NAC domain-containing protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17510_001]

Coordinates

chr11:+:19071509..19073026

Molecular Weight (calculated)

40668.8 Da

IEP (calculated)

6.564

GRAVY (calculated)

-0.652

Length

352 amino acids

Sequence
(BLAST)

001: MDAFPHVPPG FRFHPTDEEL VDYYLRKKVA SRRIDLDIIK DVDLYKIEPW DLQEKCKIGT EEQNDWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI
101: YSKNNLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEN APPQANPAIL LVLKFASMFQ EEGWVVCRVF KKRLAAVRRV SDHDTPCWYD DHASFITELD
201: SAKQISPQPE MAYHQHHHLL PCKPELEVHY HLPHDSFLQL PQLESPKLPM YVSHATAFQS SIIAEEDLIQ SSKQFQIVST YDNTGNINQV VEQVTDWRVL
301: DKFVASQLSH NDICREPNCS NSASDVQTSE KLDAASEYAS TSNSSGQVEL WK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.