Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d002828_P001 | |
| Zm00001d017396_P001 | |
| Zm00001d045600_P001 | |
| Zm00001d051294_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 66.29 | 78.38 |
| Zm00001d048456_P001 | Maize | nucleus | 62.86 | 75.34 |
| Zm00001d045600_P001 | Maize | nucleus | 55.43 | 69.78 |
| Zm00001d017396_P001 | Maize | nucleus | 54.29 | 44.6 |
| CDY00280 | Canola | nucleus | 64.57 | 43.46 |
| KXG31125 | Sorghum | nucleus | 83.43 | 42.07 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 79.43 | 39.49 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 78.86 | 39.2 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 79.43 | 39.04 |
| Zm00001d002828_P001 | Maize | cytosol | 76.0 | 38.66 |
| Os02t0643600-00 | Rice | nucleus | 79.43 | 37.57 |
| GSMUA_Achr11P... | Banana | nucleus | 75.43 | 37.5 |
| KRH62610 | Soybean | nucleus | 72.57 | 37.24 |
| Solyc03g083880.2.1 | Tomato | nucleus | 66.29 | 37.18 |
| KRH23801 | Soybean | nucleus | 73.14 | 36.89 |
| Zm00001d034984_P001 | Maize | nucleus | 58.29 | 36.82 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 74.86 | 36.49 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 78.86 | 36.22 |
| KRH39986 | Soybean | nucleus | 73.14 | 36.16 |
| KRH56355 | Soybean | nucleus | 74.86 | 36.09 |
| Solyc06g034340.1.1 | Tomato | nucleus | 69.14 | 35.59 |
| CDY16776 | Canola | nucleus | 66.29 | 34.94 |
| Bra035896.1-P | Field mustard | nucleus | 66.29 | 34.94 |
| CDX87246 | Canola | nucleus | 66.86 | 34.82 |
| AT5G62380.1 | Thale cress | nucleus | 67.43 | 33.91 |
| Bra010077.1-P | Field mustard | nucleus | 66.29 | 33.43 |
| CDY58006 | Canola | nucleus | 66.29 | 33.33 |
| Zm00001d050039_P001 | Maize | nucleus | 55.43 | 32.88 |
| CDY30716 | Canola | nucleus | 66.86 | 32.41 |
| Zm00001d003583_P001 | Maize | nucleus | 60.0 | 32.21 |
| Bra029266.1-P | Field mustard | nucleus | 66.86 | 32.14 |
| Zm00001d002934_P001 | Maize | nucleus | 58.86 | 31.4 |
| Zm00001d025483_P001 | Maize | nucleus | 57.71 | 30.06 |
| Zm00001d027459_P001 | Maize | nucleus | 64.57 | 29.82 |
| Zm00001d016119_P001 | Maize | cytosol, nucleus, plastid | 58.86 | 29.51 |
| Zm00001d046126_P001 | Maize | cytosol, nucleus, plastid | 60.0 | 29.41 |
| Zm00001d049678_P001 | Maize | nucleus | 61.14 | 28.23 |
| Zm00001d037029_P001 | Maize | nucleus | 58.86 | 28.14 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 58.86 | 28.07 |
| Zm00001d035084_P001 | Maize | nucleus | 61.14 | 25.6 |
| Bra029264.1-P | Field mustard | nucleus | 41.14 | 23.68 |
| Zm00001d045463_P001 | Maize | nucleus | 60.57 | 20.54 |
| CDY00281 | Canola | cytosol | 0.57 | 1.49 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6Q628 | ProteinID:AQK53975.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | UniParc:UPI0008433740 | EnsemblPlantsGene:Zm00001d051294 |
| EnsemblPlants:Zm00001d051294_P001 | EnsemblPlants:Zm00001d051294_T001 | SEG:seg | : | : | : |
Description
NAC-transcription factor 27Putative NAC domain transcription factor superfamily protein
Coordinates
chr4:-:152220730..152221346
Molecular Weight (calculated)
20448.5 Da
IEP (calculated)
9.493
GRAVY (calculated)
-0.702
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRVVTRDP LIERMDTFSH VPPGFRFHPT DEELVDYYLR NKVASNKIDL DVIKDVDLYK IEPWDLQEKC KIGTEEQNEW YFFSHKDKKY PTGTRTNRAT
101: TAGFWKATGR DKPIYTKSCL VGMRKTLVFY RGRAPNGHKS DWIMHEYRLE TTENVTAAPV RKPAALPDPI RTIPS
101: TAGFWKATGR DKPIYTKSCL VGMRKTLVFY RGRAPNGHKS DWIMHEYRLE TTENVTAAPV RKPAALPDPI RTIPS
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.