Factsheet for Zm00001d002828_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002828_P001
Zm00001d017396_P001
Zm00001d045600_P001
Zm00001d051294_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	Zm00001d002828_P001	AT5G62380.1	18445131
AT5G62380.1	Zm00001d017396_P001	AT5G62380.1	18445131
AT5G62380.1	Zm00001d045600_P001	AT5G62380.1	18445131
AT5G62380.1	Zm00001d051294_P001	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82026	Sorghum	nucleus	89.24	90.29
Os04t0536500-01	Rice	cytosol	39.53	83.95
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	34.01	79.05
Zm00001d048456_P001	Maize	nucleus	32.56	76.71
Zm00001d051294_P001	Maize	cytosol	38.66	76.0
Zm00001d045600_P001	Maize	nucleus	29.36	72.66
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	68.02	69.03
TraesCS2A01G386300.1	Wheat	cytosol, nucleus, peroxisome	67.73	68.73
TraesCS2D01G382800.1	Wheat	cytosol, nucleus, peroxisome	67.15	68.14
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	67.15	68.14
Zm00001d017396_P001	Maize	nucleus	41.86	67.61
GSMUA_Achr11P...	Banana	nucleus	62.21	60.8
KRH23801	Soybean	nucleus	57.27	56.77
KRH62610	Soybean	nucleus	55.81	56.3
KRH39986	Soybean	nucleus	56.98	55.37
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	57.27	54.87
Solyc03g083880.2.1	Tomato	nucleus	47.97	52.88
Solyc06g034340.1.1	Tomato	nucleus	51.74	52.35
KRH56355	Soybean	nucleus	55.23	52.34
CDY00280	Canola	nucleus	38.95	51.54
CDY16776	Canola	nucleus	43.9	45.48
Bra035896.1-P	Field mustard	nucleus	43.6	45.18
AT5G62380.1	Thale cress	nucleus	45.35	44.83
CDX87246	Canola	nucleus	43.6	44.64
CDY30716	Canola	nucleus	45.93	43.77
Bra029266.1-P	Field mustard	nucleus	46.22	43.68
Bra010077.1-P	Field mustard	nucleus	43.9	43.52
CDY58006	Canola	nucleus	43.9	43.39
Zm00001d034984_P001	Maize	nucleus	33.72	41.88
Zm00001d003583_P001	Maize	nucleus	39.53	41.72
Zm00001d027459_P001	Maize	nucleus	45.35	41.16
Zm00001d046126_P001	Maize	cytosol, nucleus, plastid	41.57	40.06
Zm00001d037029_P001	Maize	nucleus	42.15	39.62
Zm00001d016119_P001	Maize	cytosol, nucleus, plastid	40.12	39.54
Zm00001d002934_P001	Maize	nucleus	37.5	39.33
Zm00001d050039_P001	Maize	nucleus	33.43	38.98
Zm00001d025483_P001	Maize	nucleus	37.79	38.69
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	40.41	37.87
Zm00001d049678_P001	Maize	nucleus	40.7	36.94
Bra029264.1-P	Field mustard	nucleus	31.4	35.53
Zm00001d035084_P001	Maize	nucleus	42.15	34.69
Zm00001d045463_P001	Maize	nucleus	42.44	28.29
CDY00281	Canola	cytosol	4.07	20.9

Protein Annotations

EntrezGene:100273446	MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:B4FVL2	EMBL:BT041150	EMBL:BT062913
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	EMBL:JN634082
EMBL:KJ727962	InterPro:NAC-dom	InterPro:NAC_dom_sf	ProteinID:ONM15461.1	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941	UniParc:UPI00017B7AED	EnsemblPlantsGene:Zm00001d002828	EnsemblPlants:Zm00001d002828_P001
EnsemblPlants:Zm00001d002828_T001	SEG:seg	:	:	:	:

Description

NAC-transcription factor 131NAC domain-containing protein 26

Coordinates

chr2:+:24002536..24006073

Molecular Weight (calculated)

39688.7 Da

IEP (calculated)

6.627

GRAVY (calculated)

-0.763

Length

344 amino acids

Sequence
(BLAST)

001: MDAFTHVPPG FRFHPTDEEL VDYYLRKKVA LKKIDLDVIK DVDLYKIEPW DLQEKCRIGS EEQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI
101: YVKNCLVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNNN GIPHEEGWVV CRVFRKRLAT VQRMAGDSPY WFNDHAGFMA PELGSPRQAA HHQQNVMMYH
201: RQQSSYSYPC KVELEYHHLL PQEHFLQQLP QLESPKLPDL IGQVDTTLQP ACGLTQEHGA PRYTLQELQA EPLYLATGGD TDWRALDKFM ASQLSHGDIT
301: PNKDSANNYS NPALQVIQQS EEKEEALDYV STSASCGGDN DLWK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.