Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13158 | Sorghum | nucleus | 79.27 | 78.08 |
| Zm00001d048456_P001 | Maize | nucleus | 32.01 | 71.92 |
| Zm00001d045600_P001 | Maize | nucleus | 25.0 | 58.99 |
| Zm00001d051294_P001 | Maize | cytosol | 31.4 | 58.86 |
| Os08t0103900-01 | Rice | nucleus | 57.32 | 58.02 |
| Zm00001d034984_P001 | Maize | nucleus | 48.48 | 57.4 |
| Zm00001d050039_P001 | Maize | nucleus | 51.22 | 56.95 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 50.3 | 54.64 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 37.5 | 49.4 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 42.68 | 44.73 |
| CDX96362 | Canola | nucleus | 43.9 | 44.31 |
| Bra016098.1-P | Field mustard | nucleus | 43.6 | 44.27 |
| AT1G71930.2 | Thale cress | nucleus | 43.6 | 44.14 |
| Solyc06g065410.2.1 | Tomato | nucleus | 43.29 | 44.1 |
| Solyc11g018660.1.1 | Tomato | nucleus | 41.77 | 44.05 |
| CDY03671 | Canola | nucleus | 43.9 | 44.04 |
| Bra007996.1-P | Field mustard | nucleus | 43.9 | 44.04 |
| CDX72846 | Canola | nucleus | 43.6 | 44.0 |
| CDX82202 | Canola | nucleus | 43.6 | 43.73 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 37.8 | 43.36 |
| PGSC0003DMT400067086 | Potato | nucleus | 43.29 | 43.16 |
| PGSC0003DMT400002318 | Potato | nucleus | 41.46 | 43.04 |
| KRG91808 | Soybean | nucleus | 41.77 | 40.18 |
| KRH34977 | Soybean | nucleus | 42.07 | 39.88 |
| Zm00001d017396_P001 | Maize | nucleus | 25.3 | 38.97 |
| Zm00001d002828_P001 | Maize | cytosol | 39.33 | 37.5 |
| Zm00001d027459_P001 | Maize | nucleus | 42.99 | 37.2 |
| Zm00001d016119_P001 | Maize | cytosol, nucleus, plastid | 38.11 | 35.82 |
| Zm00001d003583_P001 | Maize | nucleus | 34.76 | 34.97 |
| Zm00001d046126_P001 | Maize | cytosol, nucleus, plastid | 36.28 | 33.33 |
| Zm00001d037029_P001 | Maize | nucleus | 36.89 | 33.06 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 35.98 | 32.15 |
| Zm00001d049678_P001 | Maize | nucleus | 36.89 | 31.93 |
| Zm00001d025483_P001 | Maize | nucleus | 32.62 | 31.85 |
| Zm00001d035084_P001 | Maize | nucleus | 35.98 | 28.23 |
| Zm00001d045463_P001 | Maize | nucleus | 36.59 | 23.26 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6E597 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | ProteinID:ONM15671.1 | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF103 | SUPFAM:SSF101941 | UniParc:UPI00084344A4 | EnsemblPlantsGene:Zm00001d002934 |
| EnsemblPlants:Zm00001d002934_P001 | EnsemblPlants:Zm00001d002934_T001 | SEG:seg | : | : | : |
Description
NAC-transcription factor 103NAC domain-containing protein 30
Coordinates
chr2:-:27119340..27120568
Molecular Weight (calculated)
36546.8 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.561
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQAAEESCV PPGFRFHPTE EELVGYYLAR KVASQRIDLD IIQEVDLYRI EPWDLQERCK PQHAGGGHDE QTQEWYFFSY KDRKYPSGTR TNRATAAGFW
101: KATGRDKPVL SSSTRTTRCS RVIGMRKTLV FYKGRAPNGR KSDWIMHEYR LQSNEHAPAQ ASSFILPCEE GWVVCRAFQK PIPNQRPFFP TSYAGYYDHN
201: LSTTARLHVD GDRHFLAGSS AAAAALLQQP PGLAGSSFPQ LYSDDDLESK KQLLSIPPLE SPTAMACCSD AGGYAQRSSY DEHEMMMMMI QQGGGGGEQA
301: AAAIDWNFLD SLLSATSQLH GPSGSLLQ
101: KATGRDKPVL SSSTRTTRCS RVIGMRKTLV FYKGRAPNGR KSDWIMHEYR LQSNEHAPAQ ASSFILPCEE GWVVCRAFQK PIPNQRPFFP TSYAGYYDHN
201: LSTTARLHVD GDRHFLAGSS AAAAALLQQP PGLAGSSFPQ LYSDDDLESK KQLLSIPPLE SPTAMACCSD AGGYAQRSSY DEHEMMMMMI QQGGGGGEQA
301: AAAIDWNFLD SLLSATSQLH GPSGSLLQ
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.