Factsheet for GSMUA_Achr3P22360_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G565900.1	Wheat	cytosol, nucleus, plastid	39.74	59.41
TraesCS2A01G566000.1	Wheat	nucleus	52.65	53.36
GSMUA_Achr7P23170_001	Banana	nucleus	43.71	53.01
TraesCS2B01G627000.1	Wheat	nucleus	52.65	53.0
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	45.03	52.92
TraesCS2A01G566400.1	Wheat	nucleus	48.68	52.5
TraesCS2D01G576400.1	Wheat	nucleus	52.65	52.13
TraesCS2A01G566200.1	Wheat	nucleus	52.32	51.8
TraesCS2D01G576300.1	Wheat	cytosol, mitochondrion, nucleus	53.64	51.43
TraesCS2B01G627200.1	Wheat	nucleus	53.97	51.42
Zm00001d034984_P001	Maize	nucleus	47.02	51.26
TraesCS2B01G627100.1	Wheat	nucleus	52.98	50.96
TraesCS2A01G566100.1	Wheat	nucleus	53.64	50.78
HORVU2Hr1G126080.3	Barley	nucleus	53.64	50.62
TraesCS2D01G576200.1	Wheat	nucleus	52.98	50.47
Zm00001d002934_P001	Maize	nucleus	54.64	50.3
Zm00001d050039_P001	Maize	nucleus	48.68	49.83
TraesCS2D01G576500.2	Wheat	nucleus	51.32	49.05
EES13158	Sorghum	nucleus	53.97	48.95
HORVU2Hr1G126040.14	Barley	nucleus	51.66	48.9
TraesCS2A01G566300.1	Wheat	nucleus	50.99	47.53
VIT_18s0072g01060.t01	Wine grape	nucleus	49.01	47.28
Os08t0103900-01	Rice	nucleus	50.0	46.6
TraesCS7D01G322700.1	Wheat	nucleus	48.01	46.47
TraesCS7B01G226600.1	Wheat	nucleus	48.01	46.47
TraesCS7A01G326000.1	Wheat	nucleus	47.68	46.15
PGSC0003DMT400002318	Potato	nucleus	48.01	45.89
Solyc11g018660.1.1	Tomato	nucleus	47.02	45.66
Solyc06g065410.2.1	Tomato	nucleus	48.68	45.65
PGSC0003DMT400067086	Potato	nucleus	49.01	44.98
EES14359	Sorghum	nucleus	49.34	44.48
AT1G71930.2	Thale cress	nucleus	47.68	44.44
CDX72846	Canola	nucleus	47.68	44.31
CDX96362	Canola	nucleus	47.68	44.31
Bra016098.1-P	Field mustard	nucleus	47.35	44.27
Bra007996.1-P	Field mustard	nucleus	47.35	43.73
CDY03671	Canola	nucleus	47.35	43.73
CDX82202	Canola	nucleus	47.02	43.43
KRG91808	Soybean	nucleus	49.01	43.4
GSMUA_Achr11P...	Banana	nucleus	47.35	42.81
KRH34977	Soybean	nucleus	49.01	42.77
GSMUA_Achr8P12100_001	Banana	nucleus	47.02	42.77
GSMUA_AchrUn_...	Banana	nucleus	36.09	42.75
GSMUA_Achr11P...	Banana	nucleus	44.37	42.27
Os04t0691300-00	Rice	cytosol, nucleus	39.74	41.96
GSMUA_Achr8P11590_001	Banana	cytosol	44.04	41.82
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	38.08	40.49
GSMUA_Achr10P...	Banana	nucleus	37.42	39.24
GSMUA_Achr11P...	Banana	nucleus	44.7	38.35
GSMUA_Achr7P06640_001	Banana	nucleus	43.05	38.24
GSMUA_Achr10P...	Banana	nucleus	38.74	37.74
GSMUA_Achr3P03500_001	Banana	nucleus	26.49	36.87
GSMUA_Achr3P12230_001	Banana	nucleus	41.06	36.58
GSMUA_Achr7P05980_001	Banana	nucleus	42.05	36.49
GSMUA_Achr6P36840_001	Banana	nucleus	44.37	36.31
GSMUA_Achr6P28890_001	Banana	nucleus	36.42	34.48
GSMUA_Achr9P24450_001	Banana	nucleus	39.74	34.19
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	35.76	33.75

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G22360_001
EnsemblPlants:GSMUA_Achr3P22360_001	EnsemblPlants:GSMUA_Achr3T22360_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0SGV2	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF41	SUPFAM:SSF101941
UniParc:UPI000296D31B	SEG:seg	:	:	:	:

Description

Putative NAC domain-containing protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22360_001]

Coordinates

chr3:+:23327338..23328707

Molecular Weight (calculated)

34714.6 Da

IEP (calculated)

6.349

GRAVY (calculated)

-0.747

Length

302 amino acids

Sequence
(BLAST)

001: MEKSCVPPGF RFHPTEEELV GYYLARKVAS QRIDLEVIQE VDLYRIEPWE LQDRCRHGCE EQSEWYFFSF KDRKYPSGTR TNRATAAGFW KATGRDKPVL
101: SKSRIIGMRK TLVFYKGRAP NGQRTDWIMH EYRLQSNENE PAQEEGWVVC RAFKKPNLNQ RPCYNNFGHN HYGRLAAKPT CFMDSFQGGA PYERSLGYEI
201: ELESRKNLLD QVLHIPQLDS PSLSSGFSNN EHFEGNCMGS NEHGTGDSSC HGEFVDWKVL DKLLLSQLNE SSSSSNMPIV PVNYDAGVED QGDHFLAMFD
301: RS

Best Arabidopsis Sequence Match ( AT1G71930.2 )
(BLAST)

001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS

Arabidopsis Description

NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.