Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 94.01 | 94.6 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 88.01 | 87.19 |
| TraesCS2B01G627000.1 | Wheat | nucleus | 82.33 | 87.0 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 86.75 | 86.21 |
| TraesCS2B01G627100.1 | Wheat | nucleus | 82.02 | 82.8 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 54.57 | 55.45 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 51.42 | 53.97 |
| Os08t0103900-01 | Rice | nucleus | 54.57 | 53.4 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 41.32 | 52.61 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 48.27 | 48.88 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 40.69 | 45.1 |
| Solyc11g018660.1.1 | Tomato | nucleus | 44.16 | 45.02 |
| PGSC0003DMT400002318 | Potato | nucleus | 44.8 | 44.94 |
| Solyc06g065410.2.1 | Tomato | nucleus | 44.8 | 44.1 |
| PGSC0003DMT400067086 | Potato | nucleus | 45.11 | 43.47 |
| KRG91808 | Soybean | nucleus | 45.43 | 42.23 |
| CDX96362 | Canola | nucleus | 43.22 | 42.15 |
| CDX72846 | Canola | nucleus | 43.22 | 42.15 |
| Bra016098.1-P | Field mustard | nucleus | 42.9 | 42.11 |
| AT1G71930.2 | Thale cress | nucleus | 42.9 | 41.98 |
| KRH34977 | Soybean | nucleus | 45.74 | 41.91 |
| CDX82202 | Canola | nucleus | 42.9 | 41.59 |
| Bra007996.1-P | Field mustard | nucleus | 42.9 | 41.59 |
| CDY03671 | Canola | nucleus | 42.9 | 41.59 |
| TraesCS4B01G320300.1 | Wheat | cytosol, mitochondrion, nucleus | 46.06 | 39.78 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 40.06 | 37.46 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 36.28 | 34.23 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 41.01 | 34.12 |
| TraesCS7B01G233300.1 | Wheat | nucleus | 37.54 | 31.99 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF103 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS2B01G627200 | EnsemblPlants:TraesCS2B01G627200.1 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:799046388..799047611
Molecular Weight (calculated)
35017.8 Da
IEP (calculated)
6.423
GRAVY (calculated)
-0.582
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAMEQHHEE ESCVPPGFRF HPTEEELVGY YLARKVAAQK IDLDIIQEVD LYRIEPWDLQ ERCGGGRGGR GARQVAAEDE QSSEWYFFSF KDRKYPSGTR
101: TNRATAAGFW KATGRDKPVM SSRSRGVIGM RKTLVFYRGR APNGRKTDWI IHEYRLQTNE HAPTQEEGWV VCRAFQKPTP NQRASYVFPA YTAAPGLGGY
201: YDPRPWLHGQ GGGDLQFLQS AAGAAGAGAL GFPGQGAQYS SDELLESKQS LFGNIPQLIE SPPTTTSVAG CGDTGYGISQ HGEMAAGIDW NFLDSLLSTS
301: QLHEYSATAA SQLHLQQ
101: TNRATAAGFW KATGRDKPVM SSRSRGVIGM RKTLVFYRGR APNGRKTDWI IHEYRLQTNE HAPTQEEGWV VCRAFQKPTP NQRASYVFPA YTAAPGLGGY
201: YDPRPWLHGQ GGGDLQFLQS AAGAAGAGAL GFPGQGAQYS SDELLESKQS LFGNIPQLIE SPPTTTSVAG CGDTGYGISQ HGEMAAGIDW NFLDSLLSTS
301: QLHEYSATAA SQLHLQQ
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.