Factsheet for TraesCS2B01G328300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G309800.1	Wheat	nucleus	100.0	100.0
TraesCS2A01G311500.1	Wheat	nucleus	99.7	99.7
Zm00001d003583_P001	Maize	nucleus	82.14	84.66
EES12234	Sorghum	nucleus	85.12	83.14
GSMUA_Achr6P28890_001	Banana	nucleus	60.12	63.32
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	57.74	60.62
Solyc06g063430.1.1	Tomato	nucleus	50.3	53.14
AT1G33280.1	Thale cress	nucleus	47.62	52.46
VIT_18s0089g01120.t01	Wine grape	nucleus	55.36	51.81
CDX90756	Canola	nucleus	50.89	51.51
Bra037914.1-P	Field mustard	nucleus	52.38	51.46
CDY05099	Canola	nucleus	50.89	51.35
AT4G10350.1	Thale cress	nucleus	51.19	50.44
Bra000709.1-P	Field mustard	nucleus	50.89	50.15
KRH23778	Soybean	nucleus	52.68	49.72
KRH40024	Soybean	nucleus	52.38	49.03
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	38.39	38.05
TraesCS2B01G627000.1	Wheat	nucleus	33.93	38.0
TraesCS2B01G627200.1	Wheat	nucleus	34.23	36.28
TraesCS7B01G233300.1	Wheat	nucleus	39.88	36.02
TraesCS7B01G226600.1	Wheat	nucleus	32.74	35.26
TraesCS2B01G627100.1	Wheat	nucleus	32.44	34.71
TraesCS6B01G286200.1	Wheat	cytosol	38.69	34.12
TraesCS4B01G320300.1	Wheat	cytosol, mitochondrion, nucleus	36.9	33.79

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	InterPro:BRN1/BRN2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF18	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS2B01G328300	EnsemblPlants:TraesCS2B01G328300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:470471293..470472533

Molecular Weight (calculated)

37122.1 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.716

Length

336 amino acids

Sequence
(BLAST)

001: MADFSSSNGV PPGFRFHPTD EELLLYYLKK KIGFEKFDLE VIREVDLNKI EPWDLQERCR IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD
101: KCIRTSYRKI GMRKTLVFYR GRAPHGQKSD WIMHEYRLEE IDEAQGGTSE DGWVVCRVFK KKCFFKIAGG GEGSSSQSAD AGAGHMAVSS PLGGHDHADR
201: AAMASHYMHG MHPQYHPQHA SSFYYSQMQP PEAAYSHHVQ VQDLLTNHRP AADAAGGGYD FSGLPVEHPG LDVGSSDGVA ADGLAEGRDQ TNGAADQQWQ
301: PMDGFSNGGG AAAVQQMSAM NSGQRGGEMD LWGYGR

Best Arabidopsis Sequence Match ( AT4G10350.1 )
(BLAST)

001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K

Arabidopsis Description

BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.