Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 71.47 | 71.25 |
| Zm00001d003583_P001 | Maize | nucleus | 63.95 | 62.58 |
| Zm00001d025483_P001 | Maize | nucleus | 63.95 | 60.71 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 63.32 | 60.12 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 63.32 | 60.12 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 63.32 | 60.12 |
| EES12234 | Sorghum | nucleus | 63.95 | 59.3 |
| Solyc06g063430.1.1 | Tomato | nucleus | 52.04 | 52.2 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 58.62 | 52.09 |
| CDX90756 | Canola | nucleus | 52.35 | 50.3 |
| AT1G33280.1 | Thale cress | nucleus | 47.96 | 50.16 |
| CDY05099 | Canola | nucleus | 52.35 | 50.15 |
| KRH23778 | Soybean | nucleus | 55.17 | 49.44 |
| Bra037914.1-P | Field mustard | nucleus | 52.98 | 49.42 |
| Bra000709.1-P | Field mustard | nucleus | 52.66 | 49.27 |
| KRH40024 | Soybean | nucleus | 55.17 | 49.03 |
| AT4G10350.1 | Thale cress | nucleus | 52.04 | 48.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.93 | 47.45 |
| GSMUA_Achr3P03500_001 | Banana | nucleus | 30.41 | 44.7 |
| GSMUA_Achr2P20020_001 | Banana | cytosol, nucleus, plastid | 39.5 | 44.37 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 33.54 | 41.63 |
| GSMUA_Achr10P... | Banana | nucleus | 39.81 | 40.97 |
| GSMUA_Achr3P12230_001 | Banana | nucleus | 42.95 | 40.41 |
| GSMUA_Achr10P... | Banana | nucleus | 36.36 | 40.28 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 30.09 | 38.55 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 42.01 | 38.18 |
| GSMUA_Achr11P... | Banana | nucleus | 37.62 | 37.85 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 37.3 | 37.42 |
| GSMUA_Achr7P05980_001 | Banana | nucleus | 40.75 | 37.36 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 34.48 | 36.42 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 37.3 | 35.84 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 37.62 | 35.29 |
| GSMUA_Achr11P... | Banana | nucleus | 36.68 | 35.03 |
| GSMUA_Achr11P... | Banana | nucleus | 38.56 | 34.94 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 37.3 | 32.25 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | InterPro:BRN1/BRN2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr6G28890_001 | EnsemblPlants:GSMUA_Achr6P28890_001 | EnsemblPlants:GSMUA_Achr6T28890_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0TB34 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF18 |
| SUPFAM:SSF101941 | UniParc:UPI0002958D72 | SEG:seg | : | : | : |
Description
Putative Protein BEARSKIN1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G28890_001]
Coordinates
chr6:+:29174656..29175803
Molecular Weight (calculated)
35725.6 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.777
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAASSSSS TGVPPGFRFH PTDEELLLYY LKKKVSFEKF ELEVIREVDL NNVEPWDLQE RCRIGSAPQD EWYFFSHKDR KYPTGSRTNR ATGAGFWKAT
101: GRDKCIRNSY ERIGMRKTLV FYRGRAPHGQ KTDWIMHEYR LDDSDDARGE AGGGSDDGWV VCRVFKKKCF FKGSGEGSTS QAMENHMSVA ASHDQSPSLS
201: SNYIHPNLGH HHRHLHHHNG LYYSQMPTGP YSHGQVQDLM TNHRPSGYDF GVLPGDSAPV VKPYDGALAA AAACVGMQSE RDPGPNEWAV LDGITAQQQQ
301: MNQMASQRGG EMDLWGYGK
101: GRDKCIRNSY ERIGMRKTLV FYRGRAPHGQ KTDWIMHEYR LDDSDDARGE AGGGSDDGWV VCRVFKKKCF FKGSGEGSTS QAMENHMSVA ASHDQSPSLS
201: SNYIHPNLGH HHRHLHHHNG LYYSQMPTGP YSHGQVQDLM TNHRPSGYDF GVLPGDSAPV VKPYDGALAA AAACVGMQSE RDPGPNEWAV LDGITAQQQQ
301: MNQMASQRGG EMDLWGYGK
001: MSSSNGGVPP GFRFHPTDEE LLHYYLKKKI SYEKFEMEVI KEVDLNKIEP WDLQDRCKIG STPQNEWYFF SHKDRKYPTG SRTNRATHSG FWKATGRDKC
101: IRNSYKKIGM RKTLVFYKGR APHGQKTDWI MHEYRIEDTE DDPCEDGWVV CRVFKKKNLF KVGNDVGSNI SNNRLEARSF IRRESPYQGI SMFELNKPEE
201: ISVHQYPQPP MFQPHHKPLS IGYDYSLALL PRESEYQQAC QPSGVEVGTC KAVSEWGIVN CNMVSHEDSS RAMRFEDDGN NTSSTVQPPS NLLSLRGENG
301: FLGLF
101: IRNSYKKIGM RKTLVFYKGR APHGQKTDWI MHEYRIEDTE DDPCEDGWVV CRVFKKKNLF KVGNDVGSNI SNNRLEARSF IRRESPYQGI SMFELNKPEE
201: ISVHQYPQPP MFQPHHKPLS IGYDYSLALL PRESEYQQAC QPSGVEVGTC KAVSEWGIVN CNMVSHEDSS RAMRFEDDGN NTSSTVQPPS NLLSLRGENG
301: FLGLF
Arabidopsis Description
BRN1NAC015 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.