Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40024 | Soybean | nucleus | 98.03 | 97.21 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 71.35 | 70.75 |
| CDX90756 | Canola | nucleus | 64.04 | 68.67 |
| CDY05099 | Canola | nucleus | 63.76 | 68.17 |
| Bra037914.1-P | Field mustard | nucleus | 64.61 | 67.25 |
| Bra000709.1-P | Field mustard | nucleus | 64.33 | 67.16 |
| AT4G10350.1 | Thale cress | nucleus | 62.64 | 65.4 |
| AT1G33280.1 | Thale cress | nucleus | 55.62 | 64.92 |
| Solyc06g063430.1.1 | Tomato | nucleus | 54.21 | 60.69 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 49.44 | 55.17 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 48.6 | 54.06 |
| Zm00001d003583_P001 | Maize | nucleus | 49.16 | 53.68 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 49.72 | 52.68 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 49.72 | 52.68 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 49.72 | 52.68 |
| EES12234 | Sorghum | nucleus | 50.56 | 52.33 |
| Zm00001d025483_P001 | Maize | nucleus | 48.6 | 51.49 |
| KRG97235 | Soybean | nucleus | 35.96 | 48.3 |
| KRG97237 | Soybean | nucleus | 35.96 | 48.3 |
| KRH13825 | Soybean | cytosol, nucleus, peroxisome | 39.89 | 43.56 |
| KRH43624 | Soybean | cytosol, nucleus, peroxisome | 39.04 | 42.38 |
| KRH62610 | Soybean | nucleus | 37.64 | 39.3 |
| KRH23801 | Soybean | nucleus | 38.2 | 39.19 |
| KRH76680 | Soybean | nucleus | 37.64 | 38.95 |
| KRH39986 | Soybean | nucleus | 37.92 | 38.14 |
| KRH57345 | Soybean | nucleus | 38.48 | 37.64 |
| KRH04074 | Soybean | nucleus | 38.48 | 37.43 |
| KRH47818 | Soybean | nucleus | 41.57 | 37.0 |
| KRH56355 | Soybean | nucleus | 37.64 | 36.91 |
| KRH28034 | Soybean | nucleus | 37.08 | 36.67 |
| KRH28776 | Soybean | endoplasmic reticulum, golgi, mitochondrion | 37.08 | 34.74 |
| KRH69806 | Soybean | nucleus | 35.11 | 34.53 |
| KRH06383 | Soybean | nucleus | 42.42 | 34.09 |
| KRH08100 | Soybean | nucleus | 34.55 | 33.98 |
| KRG91808 | Soybean | nucleus | 32.3 | 33.72 |
| KRH34977 | Soybean | nucleus | 32.02 | 32.95 |
Protein Annotations
| EntrezGene:100804181 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02007160 | EnsemblPlantsGene:GLYMA_12G003200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1LNQ4 | InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KRH23778 |
| ProteinID:KRH23778 | ProteinID:KRH23778.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF113 | SUPFAM:SSF101941 | UniParc:UPI000233D034 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr12:-:262438..265930
Molecular Weight (calculated)
40971.9 Da
IEP (calculated)
7.947
GRAVY (calculated)
-0.981
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSTNGGVP PGFRFHPTDE ELLHYYLKKK LSFQKFDMDV IREVDLNKME PWDLQERCRI GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDG NDPQGSANED GWVVCRVFKK KNLFKIVNEG GSTHNPDQQI NNSSNTNARS YRENHYLLHQ
201: QQNPRNSSGL ELDKPELALH YPHLQNPPYS LFQSQPLLQI QKPMVYDYSY TSDTPIMAKQ LMTNPRDCES GSDGLRYQVS ESGMEVGSCE PNQEMGTGRG
301: EGINEWGVLD RLVTSHLGNE DSSKGVRFEE ANPPSVHQIN QLSLRGEMDF WAYGKQ
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDG NDPQGSANED GWVVCRVFKK KNLFKIVNEG GSTHNPDQQI NNSSNTNARS YRENHYLLHQ
201: QQNPRNSSGL ELDKPELALH YPHLQNPPYS LFQSQPLLQI QKPMVYDYSY TSDTPIMAKQ LMTNPRDCES GSDGLRYQVS ESGMEVGSCE PNQEMGTGRG
301: EGINEWGVLD RLVTSHLGNE DSSKGVRFEE ANPPSVHQIN QLSLRGEMDF WAYGKQ
001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
Arabidopsis Description
BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.