Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05099 | Canola | nucleus | 91.5 | 93.69 |
| CDX90756 | Canola | nucleus | 91.2 | 93.67 |
| Bra000709.1-P | Field mustard | nucleus | 93.55 | 93.55 |
| Bra037914.1-P | Field mustard | nucleus | 92.38 | 92.11 |
| AT1G33280.1 | Thale cress | nucleus | 63.64 | 71.15 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 65.98 | 62.67 |
| KRH23778 | Soybean | nucleus | 65.4 | 62.64 |
| KRH40024 | Soybean | nucleus | 65.1 | 61.84 |
| Solyc06g063430.1.1 | Tomato | nucleus | 52.79 | 56.6 |
| Zm00001d003583_P001 | Maize | nucleus | 50.73 | 53.07 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 48.68 | 52.04 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 50.44 | 51.19 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 50.44 | 51.19 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 50.44 | 51.19 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 47.8 | 50.94 |
| Zm00001d025483_P001 | Maize | nucleus | 50.15 | 50.89 |
| EES12234 | Sorghum | nucleus | 50.73 | 50.29 |
| AT5G66300.1 | Thale cress | nucleus | 32.84 | 38.36 |
| AT1G32770.1 | Thale cress | nucleus | 40.18 | 38.27 |
| AT3G61910.1 | Thale cress | nucleus | 37.24 | 38.02 |
| AT2G46770.1 | Thale cress | nucleus | 39.88 | 37.26 |
| AT1G79580.4 | Thale cress | nucleus | 38.42 | 35.31 |
| AT1G71930.2 | Thale cress | nucleus | 32.55 | 34.26 |
| AT5G62380.1 | Thale cress | nucleus | 34.31 | 33.62 |
| AT2G18060.1 | Thale cress | nucleus | 34.31 | 32.05 |
| AT4G36160.2 | Thale cress | nucleus | 34.6 | 30.97 |
| AT1G12260.1 | Thale cress | nucleus | 35.48 | 30.63 |
| AT1G62700.1 | Thale cress | nucleus | 34.9 | 30.2 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:826627 | ProteinID:AEE82870.1 | Symbol:ANAC070 | ArrayExpress:AT4G10350 |
| EnsemblPlantsGene:AT4G10350 | RefSeq:AT4G10350 | TAIR:AT4G10350 | RefSeq:AT4G10350-TAIR-G | EnsemblPlants:AT4G10350.1 | TAIR:AT4G10350.1 |
| EMBL:AY133681 | InterPro:BRN1/BRN2 | ProteinID:CAB39788.1 | ProteinID:CAB78158.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009834 | GO:GO:0009987 | GO:GO:0010628 | GO:GO:0045893 |
| GO:GO:0048829 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_192773.1 |
| PFAM:PF02365 | PO:PO:0000035 | PO:PO:0009005 | PO:PO:0020131 | PO:PO:0020132 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF18 | UniProt:Q9SV87 | SUPFAM:SSF101941 | UniParc:UPI00000A43AE | : |
Description
BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
Coordinates
chr4:-:6415120..6416961
Molecular Weight (calculated)
38948.4 Da
IEP (calculated)
7.259
GRAVY (calculated)
-0.851
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.