Factsheet for Solyc06g063430.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90756	Canola	nucleus	57.23	54.82
AT1G33280.1	Thale cress	nucleus	52.52	54.75
CDY05099	Canola	nucleus	57.23	54.65
KRH23778	Soybean	nucleus	60.69	54.21
VIT_18s0089g01120.t01	Wine grape	nucleus	61.01	54.04
KRH40024	Soybean	nucleus	60.69	53.76
Bra037914.1-P	Field mustard	nucleus	57.55	53.51
Bra000709.1-P	Field mustard	nucleus	56.92	53.08
AT4G10350.1	Thale cress	nucleus	56.6	52.79
Zm00001d003583_P001	Maize	nucleus	54.09	52.76
GSMUA_Achr6P28890_001	Banana	nucleus	52.2	52.04
Zm00001d025483_P001	Maize	nucleus	54.09	51.19
EES12234	Sorghum	nucleus	55.35	51.16
TraesCS2A01G311500.1	Wheat	nucleus	53.14	50.3
TraesCS2B01G328300.1	Wheat	nucleus	53.14	50.3
TraesCS2D01G309800.1	Wheat	nucleus	53.14	50.3
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	50.0	49.69
Solyc10g005010.2.1	Tomato	nucleus	38.68	42.86
Solyc08g079120.1.1	Tomato	cytosol, nucleus, plastid	37.42	38.76
Solyc12g017400.1.1	Tomato	nucleus	38.36	38.24
Solyc08g008660.2.1	Tomato	nucleus	40.25	36.68
Solyc11g018660.1.1	Tomato	nucleus	35.85	36.66
Solyc03g083880.2.1	Tomato	nucleus	34.91	35.58
Solyc06g065410.2.1	Tomato	nucleus	35.22	34.78
Solyc02g084350.2.1	Tomato	nucleus	37.42	34.1
Solyc06g034340.1.1	Tomato	nucleus	35.53	33.24

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	InterPro:BRN1/BRN2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:K4C774	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF18	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc06g063430.1	EnsemblPlants:Solyc06g063430.1.1
UniParc:UPI0002766EEC	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:-:40107507..40110302

Molecular Weight (calculated)

36860.7 Da

IEP (calculated)

7.665

GRAVY (calculated)

-0.996

Length

318 amino acids

Sequence
(BLAST)

001: MASSSNGGVP PGFRFHPTEE ELLHYYLKKK LSFHKFDMEV IREIDLNKIE PWELQDRCNI GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK
101: CIRNSFKKIG MRKTLVFYRG RAPHGQKTDW IMHEYRLEDA DQNQNEDGWV ICRVFKKKNL FKITGNEAAS SSHHHQQPTN NFTHKDNNHD HSPYLLHQLP
201: QHHDQHHDLN YSQIPVATTL APHEYYSHNN NNIEVAQNLI KSSSLGYHQH HHPHEFSSSG ADQSAPCESG LEVASSNDHQ WGINIDSSKV ALGMGFESNQ
301: INHQLPMRGE MDFWSYGK

Best Arabidopsis Sequence Match ( AT4G10350.1 )
(BLAST)

001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K

Arabidopsis Description

BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.