Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05099 | Canola | nucleus | 99.1 | 98.8 |
| Bra000709.1-P | Field mustard | nucleus | 99.7 | 97.07 |
| AT4G10350.1 | Thale cress | nucleus | 93.67 | 91.2 |
| CDY70728 | Canola | nucleus | 35.54 | 65.92 |
| CDY72666 | Canola | nucleus | 31.63 | 64.42 |
| KRH23778 | Soybean | nucleus | 68.67 | 64.04 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 68.98 | 63.79 |
| KRH40024 | Soybean | nucleus | 68.37 | 63.23 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 30.12 | 62.89 |
| Solyc06g063430.1.1 | Tomato | nucleus | 54.82 | 57.23 |
| CDY62781 | Canola | nucleus | 26.81 | 56.33 |
| CDY35029 | Canola | cytosol | 35.24 | 56.25 |
| Zm00001d003583_P001 | Maize | nucleus | 52.11 | 53.07 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 50.3 | 52.35 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 49.1 | 50.94 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 51.51 | 50.89 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 51.51 | 50.89 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 51.51 | 50.89 |
| Zm00001d025483_P001 | Maize | nucleus | 50.9 | 50.3 |
| EES12234 | Sorghum | nucleus | 51.81 | 50.0 |
| CDY26917 | Canola | nucleus | 40.36 | 43.51 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 40.36 | 41.61 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 40.06 | 40.8 |
| CDY00280 | Canola | nucleus | 31.93 | 40.77 |
| CDX73267 | Canola | cytosol | 39.76 | 40.62 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 40.36 | 40.36 |
| CDX67870 | Canola | nucleus | 40.06 | 39.58 |
| CDY30778 | Canola | nucleus | 33.73 | 37.97 |
| CDY45221 | Canola | nucleus | 33.43 | 37.76 |
| CDY22285 | Canola | nucleus | 39.46 | 37.75 |
| CDY27524 | Canola | nucleus | 41.27 | 37.64 |
| CDX80045 | Canola | nucleus | 40.66 | 37.6 |
| CDY41554 | Canola | nucleus | 40.36 | 37.53 |
| CDY70056 | Canola | nucleus | 40.06 | 37.25 |
| CDY71976 | Canola | nucleus | 39.16 | 37.25 |
| CDX87372 | Canola | nucleus | 39.46 | 36.39 |
| CDX88550 | Canola | nucleus | 39.76 | 36.36 |
| CDX93819 | Canola | nucleus | 39.76 | 36.26 |
| CDY01243 | Canola | nucleus | 40.36 | 36.12 |
| CDY47055 | Canola | nucleus | 34.64 | 35.17 |
| CDX98078 | Canola | nucleus | 34.94 | 34.32 |
| CDY16776 | Canola | nucleus | 34.04 | 34.04 |
| CDX87246 | Canola | nucleus | 34.34 | 33.93 |
| CDY15987 | Canola | nucleus | 34.64 | 33.92 |
| CDX72580 | Canola | nucleus | 34.64 | 33.92 |
| CDY58006 | Canola | nucleus | 35.54 | 33.91 |
| CDX72846 | Canola | nucleus | 33.13 | 33.85 |
| CDX96362 | Canola | nucleus | 33.13 | 33.85 |
| CDY26551 | Canola | nucleus | 34.64 | 33.82 |
| CDX75558 | Canola | nucleus | 34.94 | 33.82 |
| CDX69208 | Canola | nucleus | 34.64 | 33.53 |
| CDY21041 | Canola | nucleus | 35.54 | 33.43 |
| CDX82202 | Canola | nucleus | 32.83 | 33.33 |
| CDY03671 | Canola | nucleus | 32.83 | 33.33 |
| CDY31835 | Canola | nucleus | 35.84 | 32.96 |
| CDY30716 | Canola | nucleus | 35.54 | 32.69 |
| CDY46914 | Canola | nucleus | 35.54 | 32.69 |
| CDY31249 | Canola | nucleus | 35.84 | 32.6 |
| CDY38177 | Canola | nucleus | 34.64 | 31.86 |
| CDY30057 | Canola | nucleus | 36.14 | 30.46 |
| CDY00281 | Canola | cytosol | 2.41 | 11.94 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DNA9 | InterPro:BRN1/BRN2 | EnsemblPlants:CDX90756 | ProteinID:CDX90756 |
| ProteinID:CDX90756.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151449001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF18 | SUPFAM:SSF101941 | UniParc:UPI0004EDEC82 | : | : |
Description
BnaA03g24360D
Coordinates
chrLK031864:-:334965..336516
Molecular Weight (calculated)
38069.4 Da
IEP (calculated)
7.161
GRAVY (calculated)
-0.885
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYHKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDT DDPQGNPSED GWVVCRVFMK KNLFKVVTEG GSSINSTDQY NHDASNNNNS LQARSFMHRD
201: SPYQLVRNHG ATTLELNKPD LTLHQYPPIF HKPPSLGFDY SAGLPRDCES AASEGLQYQQ ACEPGLEVGT CETVGEWSMM DRLVTCHMGN EDSSRGIRFE
301: DGNNNSSSVV QPVPETNQLS LRSEMDFWGY SK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDT DDPQGNPSED GWVVCRVFMK KNLFKVVTEG GSSINSTDQY NHDASNNNNS LQARSFMHRD
201: SPYQLVRNHG ATTLELNKPD LTLHQYPPIF HKPPSLGFDY SAGLPRDCES AASEGLQYQQ ACEPGLEVGT CETVGEWSMM DRLVTCHMGN EDSSRGIRFE
301: DGNNNSSSVV QPVPETNQLS LRSEMDFWGY SK
001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
Arabidopsis Description
BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.