Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026981.1-P | Field mustard | nucleus | 97.64 | 97.35 |
| CDY26551 | Canola | nucleus | 97.64 | 97.35 |
| CDX98078 | Canola | nucleus | 96.76 | 97.04 |
| CDY21041 | Canola | nucleus | 85.25 | 81.87 |
| CDY31249 | Canola | nucleus | 84.37 | 78.36 |
| AT1G12260.1 | Thale cress | nucleus | 90.27 | 77.47 |
| CDY30057 | Canola | nucleus | 89.09 | 76.65 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 34.51 | 73.58 |
| CDY46914 | Canola | nucleus | 69.03 | 64.82 |
| CDY72666 | Canola | nucleus | 30.97 | 64.42 |
| CDY31835 | Canola | nucleus | 67.85 | 63.71 |
| CDY70728 | Canola | nucleus | 30.97 | 58.66 |
| VIT_02s0154g00020.t01 | Wine grape | nucleus | 61.36 | 58.26 |
| KRH57345 | Soybean | nucleus | 61.65 | 57.42 |
| KRH04074 | Soybean | nucleus | 61.06 | 56.56 |
| Solyc08g079120.1.1 | Tomato | cytosol, nucleus, plastid | 51.03 | 56.35 |
| CDY35029 | Canola | cytosol | 32.45 | 52.88 |
| PGSC0003DMT400012079 | Potato | nucleus | 46.31 | 52.68 |
| KRH28034 | Soybean | nucleus | 55.75 | 52.5 |
| CDY00280 | Canola | nucleus | 38.64 | 50.38 |
| CDY62781 | Canola | nucleus | 23.3 | 50.0 |
| CDY45221 | Canola | nucleus | 43.36 | 50.0 |
| CDY30778 | Canola | nucleus | 43.07 | 49.49 |
| CDY47055 | Canola | nucleus | 46.31 | 48.01 |
| CDX72580 | Canola | nucleus | 46.31 | 46.31 |
| CDX69208 | Canola | nucleus | 46.61 | 46.06 |
| CDX87246 | Canola | nucleus | 45.13 | 45.54 |
| CDY16776 | Canola | nucleus | 44.54 | 45.48 |
| CDY58006 | Canola | nucleus | 46.61 | 45.4 |
| CDX75558 | Canola | nucleus | 44.84 | 44.31 |
| CDY30716 | Canola | nucleus | 46.31 | 43.49 |
| CDY38177 | Canola | nucleus | 46.02 | 43.21 |
| CDY26917 | Canola | nucleus | 37.76 | 41.56 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 39.23 | 41.3 |
| CDY03671 | Canola | nucleus | 38.94 | 40.37 |
| CDX82202 | Canola | nucleus | 38.94 | 40.37 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 39.23 | 40.06 |
| CDX96362 | Canola | nucleus | 38.35 | 40.0 |
| CDX72846 | Canola | nucleus | 38.35 | 40.0 |
| CDX73267 | Canola | cytosol | 37.46 | 39.08 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 37.46 | 38.96 |
| CDY41554 | Canola | nucleus | 41.0 | 38.94 |
| CDY27524 | Canola | nucleus | 41.59 | 38.74 |
| CDX80045 | Canola | nucleus | 41.0 | 38.72 |
| CDX67870 | Canola | nucleus | 37.76 | 38.1 |
| CDX93819 | Canola | nucleus | 39.23 | 36.54 |
| CDY01243 | Canola | nucleus | 39.23 | 35.85 |
| CDX90756 | Canola | nucleus | 33.92 | 34.64 |
| CDY05099 | Canola | nucleus | 33.92 | 34.53 |
| CDY22285 | Canola | nucleus | 33.92 | 33.14 |
| CDY71976 | Canola | nucleus | 33.63 | 32.66 |
| CDX87372 | Canola | nucleus | 34.22 | 32.22 |
| CDX88550 | Canola | nucleus | 34.22 | 31.96 |
| CDY70056 | Canola | nucleus | 33.63 | 31.93 |
| CDY00281 | Canola | cytosol | 5.9 | 29.85 |
| Os04t0443801-02 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FT05 | UniProt:A0A078FT05 | EnsemblPlants:CDY15987 | ProteinID:CDY15987 |
| ProteinID:CDY15987.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00090371001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | UniParc:UPI0004EF30CC | : | : | : |
Description
BnaC08g41360DBnaC08g41360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT05]
Coordinates
chrLK032060:-:105234..106837
Molecular Weight (calculated)
39398.8 Da
IEP (calculated)
6.379
GRAVY (calculated)
-0.901
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLLELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYMGRA PNGQKSDWIM HEYRLETDEN GAPQEEGWVV CRVFKKRLPA VIRRMGDYDS SPSHWYDEQL SFMASELETN GPRRIVPNHQ
201: QQHHQPFSYG LNASVYALNN PNLQCKQELE LQYSHLQSNQ VHEEQMNQGN KSFSSLYMNS GNGQTMDQVT DWRSLDKFVA SQLSNEEATT ASASLQNNAK
301: DTSNVEYQID EEKDQKRGSD MGEEYAASTS SSCQIDLWK
101: YLRHSLIGMR KTLVFYMGRA PNGQKSDWIM HEYRLETDEN GAPQEEGWVV CRVFKKRLPA VIRRMGDYDS SPSHWYDEQL SFMASELETN GPRRIVPNHQ
201: QQHHQPFSYG LNASVYALNN PNLQCKQELE LQYSHLQSNQ VHEEQMNQGN KSFSSLYMNS GNGQTMDQVT DWRSLDKFVA SQLSNEEATT ASASLQNNAK
301: DTSNVEYQID EEKDQKRGSD MGEEYAASTS SSCQIDLWK
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.