Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46914 | Canola | nucleus | 97.78 | 97.78 |
| Bra027024.1-P | Field mustard | nucleus | 94.18 | 86.73 |
| AT1G62700.1 | Thale cress | nucleus | 80.33 | 73.6 |
| CDY31249 | Canola | nucleus | 74.24 | 73.42 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 31.86 | 72.33 |
| CDY21041 | Canola | nucleus | 67.87 | 69.41 |
| CDX98078 | Canola | nucleus | 64.27 | 68.64 |
| CDY26551 | Canola | nucleus | 63.99 | 67.94 |
| CDY15987 | Canola | nucleus | 63.71 | 67.85 |
| CDY30057 | Canola | nucleus | 72.85 | 66.75 |
| CDY72666 | Canola | nucleus | 29.36 | 65.03 |
| VIT_02s0154g00020.t01 | Wine grape | nucleus | 63.43 | 64.15 |
| KRH04074 | Soybean | nucleus | 60.94 | 60.11 |
| KRH57345 | Soybean | nucleus | 60.11 | 59.62 |
| Solyc08g079120.1.1 | Tomato | cytosol, nucleus, plastid | 50.42 | 59.28 |
| CDY70728 | Canola | nucleus | 29.36 | 59.22 |
| KRH28034 | Soybean | nucleus | 57.62 | 57.78 |
| PGSC0003DMT400012079 | Potato | nucleus | 45.98 | 55.7 |
| CDY35029 | Canola | cytosol | 30.47 | 52.88 |
| CDY45221 | Canola | nucleus | 40.72 | 50.0 |
| CDY00280 | Canola | nucleus | 36.01 | 50.0 |
| CDY62781 | Canola | nucleus | 21.88 | 50.0 |
| CDY30778 | Canola | nucleus | 40.44 | 49.49 |
| CDY47055 | Canola | nucleus | 42.11 | 46.48 |
| CDY16776 | Canola | nucleus | 42.11 | 45.78 |
| CDX87246 | Canola | nucleus | 41.83 | 44.94 |
| CDX69208 | Canola | nucleus | 42.66 | 44.9 |
| CDY38177 | Canola | nucleus | 44.88 | 44.88 |
| CDX72580 | Canola | nucleus | 42.11 | 44.84 |
| CDX75558 | Canola | nucleus | 42.38 | 44.61 |
| CDY58006 | Canola | nucleus | 42.66 | 44.25 |
| CDY30716 | Canola | nucleus | 43.77 | 43.77 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 37.67 | 42.24 |
| CDY03671 | Canola | nucleus | 37.12 | 40.98 |
| CDX82202 | Canola | nucleus | 37.12 | 40.98 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 37.67 | 40.96 |
| CDX80045 | Canola | nucleus | 40.72 | 40.95 |
| CDX72846 | Canola | nucleus | 36.84 | 40.92 |
| CDX96362 | Canola | nucleus | 36.84 | 40.92 |
| CDY41554 | Canola | nucleus | 40.44 | 40.9 |
| CDY26917 | Canola | nucleus | 34.63 | 40.58 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 36.29 | 40.18 |
| CDY27524 | Canola | nucleus | 40.44 | 40.11 |
| CDX67870 | Canola | nucleus | 36.29 | 38.99 |
| CDX73267 | Canola | cytosol | 34.35 | 38.15 |
| CDX93819 | Canola | nucleus | 37.95 | 37.64 |
| CDY01243 | Canola | nucleus | 37.95 | 36.93 |
| CDY71976 | Canola | nucleus | 35.18 | 36.39 |
| CDY22285 | Canola | nucleus | 34.63 | 36.02 |
| CDX90756 | Canola | nucleus | 32.96 | 35.84 |
| CDX87372 | Canola | nucleus | 35.73 | 35.83 |
| CDY05099 | Canola | nucleus | 32.96 | 35.74 |
| CDX88550 | Canola | nucleus | 35.73 | 35.54 |
| CDY70056 | Canola | nucleus | 34.9 | 35.29 |
| CDY00281 | Canola | cytosol | 5.26 | 28.36 |
| Os04t0443801-02 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GZC6 | UniProt:A0A078GZC6 | EnsemblPlants:CDY31835 | ProteinID:CDY31835 |
| ProteinID:CDY31835.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00050536001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | UniParc:UPI0004EEF385 | SEG:seg | : | : |
Description
BnaC09g13140DBnaC09g13140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZC6]
Coordinates
chrLK032280:-:271108..272860
Molecular Weight (calculated)
41859.4 Da
IEP (calculated)
6.378
GRAVY (calculated)
-0.952
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DVDLYKIEPW DLQELCKIGN EEQSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKSI
101: YLRHGLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEY GTPQEEGWAV CRVFKKRLAS TMRKMGDYDS SPSHWFDDQL SFMASELDSN PPKLELHYNH
201: MVQHEQQNHH HHESIFFQLP QLESPNSNCN SLPYGSSNNG NNTRNIGDLQ QSSNLTHEEH LQQGSQSFRS VCYDQGDQVS TDWRVLDKFV ASQLSEEVAA
301: TASASTHQNN NKMDARNTDY QVHQGMNLLD NDSERVVDMG EEHANAHAGF DSSSCQMDLW K
101: YLRHGLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEY GTPQEEGWAV CRVFKKRLAS TMRKMGDYDS SPSHWFDDQL SFMASELDSN PPKLELHYNH
201: MVQHEQQNHH HHESIFFQLP QLESPNSNCN SLPYGSSNNG NNTRNIGDLQ QSSNLTHEEH LQQGSQSFRS VCYDQGDQVS TDWRVLDKFV ASQLSEEVAA
301: TASASTHQNN NKMDARNTDY QVHQGMNLLD NDSERVVDMG EEHANAHAGF DSSSCQMDLW K
001: MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDIIK DVDLYKIEPC DLQELCKIGN EEQSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YIRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETSEN GTPQEEGWVV CRVFKKKLAA TVRKMGDYHS SPSQHWYDDQ LSFMASEIIS SSPRQFLPNH
201: HYNRHHHQQT LPCGLNAFNN NNPNLQCKQE LELHYNQMVQ HQQQNHHLRE SMFLQLPQLE SPTSNCNSDN NNNTRNISNL QKSSNISHEE QLQQGNQSFS
301: SLYYDQGVEQ MTTDWRVLDK FVASQLSNDE EAAAVVSSSS HQNNVKIDTR NTGYHVIDEG INLPENDSER VVEMGEEYSN AHAASTSSSC QIDL
101: YIRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETSEN GTPQEEGWVV CRVFKKKLAA TVRKMGDYHS SPSQHWYDDQ LSFMASEIIS SSPRQFLPNH
201: HYNRHHHQQT LPCGLNAFNN NNPNLQCKQE LELHYNQMVQ HQQQNHHLRE SMFLQLPQLE SPTSNCNSDN NNNTRNISNL QKSSNISHEE QLQQGNQSFS
301: SLYYDQGVEQ MTTDWRVLDK FVASQLSNDE EAAAVVSSSS HQNNVKIDTR NTGYHVIDEG INLPENDSER VVEMGEEYSN AHAASTSSSC QIDL
Arabidopsis Description
NAC026NAC domain-containing protein 26 [Source:UniProtKB/Swiss-Prot;Acc:F4HYV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.