Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00280 | Canola | nucleus | 64.54 | 89.62 |
| CDY58006 | Canola | nucleus | 86.15 | 89.37 |
| AT5G62380.1 | Thale cress | nucleus | 85.04 | 88.22 |
| Bra029264.1-P | Field mustard | nucleus | 71.75 | 85.2 |
| CDY00281 | Canola | cytosol | 15.51 | 83.58 |
| CDY16776 | Canola | nucleus | 76.73 | 83.43 |
| CDX87246 | Canola | nucleus | 77.29 | 83.04 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 31.3 | 76.35 |
| Os04t0536500-01 | Rice | cytosol | 31.3 | 69.75 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 29.92 | 67.92 |
| Zm00001d045600_P001 | Maize | nucleus | 25.76 | 66.91 |
| Zm00001d051294_P001 | Maize | cytosol | 32.41 | 66.86 |
| CDY72666 | Canola | nucleus | 27.7 | 61.35 |
| CDY70728 | Canola | nucleus | 27.7 | 55.87 |
| CDY35029 | Canola | cytosol | 30.19 | 52.4 |
| Solyc03g083880.2.1 | Tomato | nucleus | 42.11 | 48.72 |
| OQU82026 | Sorghum | nucleus | 45.43 | 48.24 |
| KRH62610 | Soybean | nucleus | 45.43 | 48.09 |
| Zm00001d017396_P001 | Maize | nucleus | 28.25 | 47.89 |
| KRH23801 | Soybean | nucleus | 45.71 | 47.55 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 44.6 | 47.35 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 44.04 | 47.32 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 44.04 | 47.32 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 43.77 | 47.02 |
| CDX98078 | Canola | nucleus | 43.77 | 46.75 |
| KRH39986 | Soybean | nucleus | 45.43 | 46.33 |
| OQU75680 | Sorghum | nucleus | 43.49 | 46.31 |
| CDY15987 | Canola | nucleus | 43.49 | 46.31 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 45.98 | 46.24 |
| GSMUA_Achr11P... | Banana | nucleus | 40.44 | 46.06 |
| Zm00001d002828_P001 | Maize | cytosol | 43.77 | 45.93 |
| CDY26551 | Canola | nucleus | 43.21 | 45.88 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 44.6 | 45.74 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 44.6 | 45.74 |
| KRH56355 | Soybean | nucleus | 45.98 | 45.73 |
| KXG31125 | Sorghum | nucleus | 43.77 | 45.53 |
| CDY21041 | Canola | nucleus | 44.32 | 45.33 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 44.6 | 45.22 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 39.61 | 44.97 |
| CDY62781 | Canola | nucleus | 19.67 | 44.94 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 41.83 | 44.54 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 41.55 | 44.25 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 41.55 | 44.25 |
| CDY45221 | Canola | nucleus | 36.01 | 44.22 |
| CDY31249 | Canola | nucleus | 44.6 | 44.11 |
| CDY46914 | Canola | nucleus | 44.04 | 44.04 |
| GSMUA_Achr11P... | Banana | nucleus | 42.94 | 44.03 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 41.27 | 43.95 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 42.38 | 43.84 |
| CDY31835 | Canola | nucleus | 43.77 | 43.77 |
| CDY30778 | Canola | nucleus | 35.73 | 43.73 |
| Os02t0643600-00 | Rice | nucleus | 44.6 | 43.51 |
| CDY47055 | Canola | nucleus | 38.78 | 42.81 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 44.88 | 42.52 |
| Os06t0104200-01 | Rice | nucleus | 42.38 | 42.03 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 42.38 | 41.46 |
| CDX72580 | Canola | nucleus | 38.5 | 41.0 |
| CDX69208 | Canola | nucleus | 38.5 | 40.52 |
| CDY30057 | Canola | nucleus | 44.04 | 40.36 |
| CDX75558 | Canola | nucleus | 37.95 | 39.94 |
| CDX82202 | Canola | nucleus | 35.18 | 38.84 |
| CDX72846 | Canola | nucleus | 34.9 | 38.77 |
| CDY03671 | Canola | nucleus | 34.9 | 38.53 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 34.35 | 38.51 |
| CDX96362 | Canola | nucleus | 34.63 | 38.46 |
| CDY38177 | Canola | nucleus | 37.67 | 37.67 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 34.35 | 37.35 |
| CDY26917 | Canola | nucleus | 31.86 | 37.34 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 33.52 | 37.12 |
| CDX67870 | Canola | nucleus | 34.07 | 36.61 |
| CDY27524 | Canola | nucleus | 36.29 | 35.99 |
| CDY41554 | Canola | nucleus | 35.18 | 35.57 |
| CDX90756 | Canola | nucleus | 32.69 | 35.54 |
| CDY05099 | Canola | nucleus | 32.69 | 35.44 |
| CDX80045 | Canola | nucleus | 35.18 | 35.38 |
| CDX73267 | Canola | cytosol | 31.58 | 35.08 |
| CDX93819 | Canola | nucleus | 32.96 | 32.69 |
| CDY01243 | Canola | nucleus | 33.24 | 32.34 |
| CDY22285 | Canola | nucleus | 31.02 | 32.28 |
| CDX87372 | Canola | nucleus | 31.3 | 31.39 |
| CDX88550 | Canola | nucleus | 31.3 | 31.13 |
| CDY71976 | Canola | nucleus | 29.92 | 30.95 |
| CDY70056 | Canola | nucleus | 30.47 | 30.81 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GYY3 | UniProt:A0A078GYY3 | EnsemblPlants:CDY30716 | ProteinID:CDY30716 |
| ProteinID:CDY30716.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00046056001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | UniParc:UPI0004EE132F | SEG:seg | : | : |
Description
BnaA02g33380DBnaA02g33380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYY3]
Coordinates
chrLK032258:+:249485..250710
Molecular Weight (calculated)
41474.8 Da
IEP (calculated)
5.450
GRAVY (calculated)
-0.936
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLTHIPPG YRFHPTDEEL VDYYLKKKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT REEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MSYNNPRTMM GPSGQESNWF THQMHVANGS YYHLPDLESP
201: RMFQGSSSSH HNDNDPYGVV LSTINATPTT LVQGDDEEDH GNIITNDDDG HIITNDDDHG HFITNDNMIM MNTNTDHHHH QGLLLSDDHN DHMMDWQTLD
301: KLVASQLIMS QEEEEVNKDP SDNSSNETFH HHLSGEQATI ASMNASSSPC SFYSWPQNTN T
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MSYNNPRTMM GPSGQESNWF THQMHVANGS YYHLPDLESP
201: RMFQGSSSSH HNDNDPYGVV LSTINATPTT LVQGDDEEDH GNIITNDDDG HIITNDDDHG HFITNDNMIM MNTNTDHHHH QGLLLSDDHN DHMMDWQTLD
301: KLVASQLIMS QEEEEVNKDP SDNSSNETFH HHLSGEQATI ASMNASSSPC SFYSWPQNTN T
001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
Arabidopsis Description
NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.