Factsheet for HORVU6Hr1G060800.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G092030.2
HORVU6Hr1G060800.3
HORVU7Hr1G000140.6

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	HORVU2Hr1G092030.2	AT5G62380.1	18445131
AT5G62380.1	HORVU6Hr1G060800.3	AT5G62380.1	18445131
AT5G62380.1	HORVU7Hr1G000140.6	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G220600.1	Wheat	nucleus	91.57	92.61
TraesCS6A01G237900.1	Wheat	nucleus	91.29	92.33
TraesCS6B01G286200.1	Wheat	cytosol	93.54	87.4
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	33.43	80.41
Zm00001d051294_P001	Maize	cytosol	39.04	79.43
Zm00001d017396_P001	Maize	nucleus	46.07	77.0
KXG31125	Sorghum	nucleus	74.44	76.37
Os02t0643600-00	Rice	nucleus	78.37	75.41
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	11.8	66.67
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	62.92	66.08
GSMUA_Achr11P...	Banana	nucleus	58.99	59.66
KRH23801	Soybean	nucleus	57.02	58.5
KRH39986	Soybean	nucleus	56.74	57.06
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	57.02	56.55
KRH62610	Soybean	nucleus	53.65	56.01
HORVU7Hr1G000140.6	Barley	nucleus	53.65	54.73
KRH56355	Soybean	nucleus	54.78	53.72
Solyc03g083880.2.1	Tomato	nucleus	45.79	52.24
Solyc06g034340.1.1	Tomato	nucleus	49.72	52.06
CDY00280	Canola	nucleus	37.92	51.92
AT5G62380.1	Thale cress	nucleus	45.22	46.26
CDY16776	Canola	nucleus	42.7	45.78
Bra035896.1-P	Field mustard	nucleus	42.42	45.48
Bra010077.1-P	Field mustard	nucleus	43.82	44.96
CDY58006	Canola	nucleus	43.82	44.83
CDX87246	Canola	nucleus	42.13	44.64
CDY30716	Canola	nucleus	45.22	44.6
Bra029266.1-P	Field mustard	nucleus	44.94	43.96
HORVU4Hr1G083050.3	Barley	cytosol, mitochondrion, nucleus	44.38	42.93
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	30.06	41.96
HORVU2Hr1G126080.3	Barley	nucleus	36.52	40.62
HORVU2Hr1G126040.14	Barley	nucleus	34.55	38.56
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	41.85	37.44
HORVU7Hr1G079500.1	Barley	nucleus	38.76	37.3
Bra029264.1-P	Field mustard	nucleus	31.18	36.51
HORVU7Hr1G012780.1	Barley	nucleus	40.17	31.92
HORVU7Hr1G012760.6	Barley	plastid	39.04	30.35
CDY00281	Canola	cytosol	4.49	23.88

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU6Hr1G060800
EnsemblPlants:HORVU6Hr1G060800.3	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0X0R1	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941	UniParc:UPI000296DDC9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:406088173..406097727

Molecular Weight (calculated)

40623.4 Da

IEP (calculated)

7.167

GRAVY (calculated)

-0.830

Length

356 amino acids

Sequence
(BLAST)

001: MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQEKCKIGM EEQNDWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKPI
101: YTNHCLVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEN GATPEEGWVV CRVFKKRVAT VRRMADMSSP CWFDDHGTGG AFMPDLDSPR QLGYQHHHPQ
201: NLAAYHSQPQ QQQHLYHCKP ELEYHHLLPQ EAFMQQLPHL ESPKPTANIG HGSSSSSSLP LSTSNHPLAH DGASRFAAHQ PQMDHALYAG DSSATDWRLL
301: DKFVASQLFS HDGTNPKEQA THPNPAVQVF QAENRHEQAL DYASTSADGG SAHLWK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.