Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc03g083880.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G62380.1 | Solyc03g083880.2.1 | AT5G62380.1 | 18445131 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0536500-01 | Rice | cytosol | 35.9 | 69.14 |
| Zm00001d051294_P001 | Maize | cytosol | 37.18 | 66.29 |
| Zm00001d045600_P001 | Maize | nucleus | 29.17 | 65.47 |
| Solyc06g034340.1.1 | Tomato | nucleus | 64.42 | 59.12 |
| Solyc08g079120.1.1 | Tomato | cytosol, nucleus, plastid | 53.21 | 54.07 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 55.13 | 51.19 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 54.81 | 50.89 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 55.45 | 50.88 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 54.49 | 50.6 |
| GSMUA_Achr11P... | Banana | nucleus | 57.05 | 50.57 |
| OQU75680 | Sorghum | nucleus | 54.49 | 50.15 |
| GSMUA_Achr11P... | Banana | nucleus | 50.64 | 49.84 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 50.0 | 49.06 |
| OQU82026 | Sorghum | nucleus | 53.21 | 48.82 |
| KXG31125 | Sorghum | nucleus | 53.85 | 48.41 |
| CDY00280 | Canola | nucleus | 40.06 | 48.08 |
| Zm00001d002828_P001 | Maize | cytosol | 52.88 | 47.97 |
| Zm00001d017396_P001 | Maize | nucleus | 32.37 | 47.42 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 52.88 | 47.28 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 52.56 | 46.59 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 52.56 | 46.59 |
| Solyc02g084350.2.1 | Tomato | nucleus | 51.6 | 46.13 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 52.24 | 45.79 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 49.68 | 45.72 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 49.68 | 45.72 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 49.36 | 45.43 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 49.36 | 45.43 |
| Os02t0643600-00 | Rice | nucleus | 53.85 | 45.41 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 53.53 | 45.26 |
| CDY16776 | Canola | nucleus | 47.76 | 44.88 |
| Os06t0104200-01 | Rice | nucleus | 52.24 | 44.78 |
| CDX87246 | Canola | nucleus | 48.08 | 44.64 |
| Bra035896.1-P | Field mustard | nucleus | 47.44 | 44.58 |
| Solyc10g005010.2.1 | Tomato | nucleus | 40.06 | 43.55 |
| AT5G62380.1 | Thale cress | nucleus | 48.4 | 43.39 |
| Bra010077.1-P | Field mustard | nucleus | 48.08 | 43.23 |
| CDY58006 | Canola | nucleus | 48.08 | 43.1 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 51.92 | 42.52 |
| Solyc11g018660.1.1 | Tomato | nucleus | 41.99 | 42.12 |
| CDY30716 | Canola | nucleus | 48.72 | 42.11 |
| Bra029266.1-P | Field mustard | nucleus | 48.4 | 41.48 |
| Solyc12g017400.1.1 | Tomato | nucleus | 42.31 | 41.38 |
| Solyc06g065410.2.1 | Tomato | nucleus | 40.06 | 38.82 |
| Solyc08g008660.2.1 | Tomato | nucleus | 42.31 | 37.82 |
| Solyc06g063430.1.1 | Tomato | nucleus | 35.58 | 34.91 |
| Bra029264.1-P | Field mustard | nucleus | 33.65 | 34.54 |
| CDY00281 | Canola | cytosol | 5.45 | 25.37 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005975 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009058 | GO:GO:0009531 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009620 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009735 | GO:GO:0009737 | GO:GO:0009741 |
| GO:GO:0009987 | GO:GO:0010089 | GO:GO:0010981 | GO:GO:0030154 | GO:GO:0030312 | GO:GO:0042803 |
| GO:GO:0043068 | GO:GO:0043565 | GO:GO:0045491 | GO:GO:0045893 | GO:GO:0048759 | GO:GO:0090058 |
| InterPro:IPR003441 | InterPro:IPR036093 | UniProt:K4BIG3 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | EnsemblPlantsGene:Solyc03g083880.2 | EnsemblPlants:Solyc03g083880.2.1 |
| UniParc:UPI0002768CFC | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:53814949..53817798
Molecular Weight (calculated)
36455.6 Da
IEP (calculated)
6.836
GRAVY (calculated)
-0.850
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSFSQIPPG FRFHPTDEEL VDYYLKKKIT STRIDLDVIK EVNLYNIEPW DLQELCRIGR EEEDEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAV
101: YSNHDLIGMR KTLVFYKGRA PHGLKSDWIM HEYRLHTDPN GAHQEEGWVV CRVFKKKMAS TRKESEKESP NNNDQVPFMP NHIVSQHNYP CKKELIDNLN
201: YQIQIPSHHH HHQQSPKLVP STSISVYNNL QQSVSLLTRE QVVDQVTDWR VLHKFVASQL SQEEENDYYS NTLHGVTDES NLNKQETVTE NNSTASSCFQ
301: IDLGKYTSLF VD
101: YSNHDLIGMR KTLVFYKGRA PHGLKSDWIM HEYRLHTDPN GAHQEEGWVV CRVFKKKMAS TRKESEKESP NNNDQVPFMP NHIVSQHNYP CKKELIDNLN
201: YQIQIPSHHH HHQQSPKLVP STSISVYNNL QQSVSLLTRE QVVDQVTDWR VLHKFVASQL SQEEENDYYS NTLHGVTDES NLNKQETVTE NNSTASSCFQ
301: IDLGKYTSLF VD
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.