Factsheet for GSMUA_Achr7P06640_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr6P36840_001
GSMUA_Achr7P06640_001
GSMUA_Achr8P11590_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr11P...	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr6P36840_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr7P06640_001	AT5G62380.1	18445131
AT5G62380.1	GSMUA_Achr8P11590_001	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	36.47	83.78
Zm00001d045600_P001	Maize	nucleus	30.29	74.1
GSMUA_Achr6P36840_001	Banana	nucleus	73.24	67.48
TraesCS7A01G008800.1	Wheat	nucleus	61.18	61.9
TraesCS7D01G008500.1	Wheat	nucleus	61.18	61.9
TraesCS4A01G486200.1	Wheat	nucleus	60.88	61.61
KRH39986	Soybean	nucleus	64.12	61.58
OQU75680	Sorghum	nucleus	61.18	61.36
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	64.71	61.28
KRH23801	Soybean	nucleus	62.35	61.1
KRH62610	Soybean	nucleus	60.88	60.7
GSMUA_Achr11P...	Banana	nucleus	61.47	59.38
GSMUA_Achr8P11590_001	Banana	cytosol	54.41	58.18
KRH56355	Soybean	nucleus	62.06	58.13
GSMUA_Achr11P...	Banana	nucleus	53.53	57.41
HORVU7Hr1G000140.6	Barley	nucleus	58.82	57.31
Solyc06g034340.1.1	Tomato	nucleus	57.06	57.06
Solyc03g083880.2.1	Tomato	nucleus	50.88	55.45
Os06t0104200-01	Rice	nucleus	58.82	54.95
CDY00280	Canola	nucleus	39.71	51.92
GSMUA_AchrUn_...	Banana	nucleus	35.88	47.84
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	35.88	47.47
Bra010077.1-P	Field mustard	nucleus	47.65	46.69
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	38.82	46.48
GSMUA_Achr8P12100_001	Banana	nucleus	45.29	46.39
AT5G62380.1	Thale cress	nucleus	47.35	46.26
CDY16776	Canola	nucleus	45.0	46.08
CDY58006	Canola	nucleus	47.06	45.98
Bra035896.1-P	Field mustard	nucleus	44.71	45.78
CDX87246	Canola	nucleus	45.0	45.54
CDY30716	Canola	nucleus	47.35	44.6
GSMUA_Achr11P...	Banana	nucleus	43.53	44.31
Bra029266.1-P	Field mustard	nucleus	47.06	43.96
GSMUA_Achr7P23170_001	Banana	nucleus	32.06	43.78
GSMUA_Achr3P22360_001	Banana	nucleus	38.24	43.05
GSMUA_Achr10P...	Banana	nucleus	35.0	41.32
GSMUA_Achr10P...	Banana	nucleus	37.65	41.29
GSMUA_Achr3P03500_001	Banana	nucleus	26.18	41.01
GSMUA_Achr3P12230_001	Banana	nucleus	40.29	40.41
GSMUA_Achr7P05980_001	Banana	nucleus	38.53	37.64
GSMUA_Achr6P28890_001	Banana	nucleus	35.29	37.62
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	35.29	37.5
GSMUA_Achr9P24450_001	Banana	nucleus	38.53	37.32
Bra029264.1-P	Field mustard	nucleus	31.47	35.2
CDY00281	Canola	cytosol	5.88	29.85

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G06640_001
EnsemblPlants:GSMUA_Achr7P06640_001	EnsemblPlants:GSMUA_Achr7T06640_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TFA4	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941
UniParc:UPI000296296B	SEG:seg	:	:	:	:

Description

Putative NAC domain-containing protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr7G06640_001]

Coordinates

chr7:+:4883239..4884894

Molecular Weight (calculated)

39847.8 Da

IEP (calculated)

6.616

GRAVY (calculated)

-0.886

Length

340 amino acids

Sequence
(BLAST)

001: MNTISHVPPG FRFHPTDEEL VDYYLRKKVA ARKIDLDVIK DVDLYKIEPW DLQEICRIGA EEQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI
101: YSKHRLVGMR KTLVYYKGRA PNGQKSDWIM HEYRLETSEN GPPQAILKCH EEGWVVCRVF KKRVPTARKA SDELPWYDEQ GSFMQDIDSP KRTMPQPAME
201: YHHHHQLYSY KREIKLHYRS PHEALDHELP PVEPPMIFSY LNHGDSLQRL IFSENEAVQP RHQLQATTTD NNDENVSQAS DQVTDWRILD KFVAAQLSHD
301: GSKKPIYSDE DDLLQVADEQ EVAMEFPSTS TSSCQMYPWK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.