Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P28890_001 | Banana | nucleus | 71.25 | 71.47 |
| Zm00001d003583_P001 | Maize | nucleus | 60.94 | 59.82 |
| Zm00001d025483_P001 | Maize | nucleus | 60.62 | 57.74 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 60.62 | 57.74 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 60.62 | 57.74 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 60.31 | 57.44 |
| EES12234 | Sorghum | nucleus | 60.31 | 56.1 |
| AT1G33280.1 | Thale cress | nucleus | 49.38 | 51.8 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 56.25 | 50.14 |
| Solyc06g063430.1.1 | Tomato | nucleus | 49.69 | 50.0 |
| CDY05099 | Canola | nucleus | 51.25 | 49.25 |
| CDX90756 | Canola | nucleus | 50.94 | 49.1 |
| KRH23778 | Soybean | nucleus | 54.06 | 48.6 |
| Bra037914.1-P | Field mustard | nucleus | 51.56 | 48.25 |
| KRH40024 | Soybean | nucleus | 54.06 | 48.19 |
| Bra000709.1-P | Field mustard | nucleus | 50.94 | 47.8 |
| AT4G10350.1 | Thale cress | nucleus | 50.94 | 47.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.62 | 44.71 |
| GSMUA_Achr2P20020_001 | Banana | cytosol, nucleus, plastid | 38.44 | 43.31 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 32.81 | 40.86 |
| GSMUA_Achr3P03500_001 | Banana | nucleus | 27.5 | 40.55 |
| GSMUA_Achr10P... | Banana | nucleus | 37.81 | 39.03 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 38.75 | 38.99 |
| GSMUA_Achr10P... | Banana | nucleus | 34.69 | 38.54 |
| GSMUA_Achr3P12230_001 | Banana | nucleus | 40.31 | 38.05 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 29.06 | 37.35 |
| GSMUA_Achr11P... | Banana | nucleus | 36.56 | 36.91 |
| GSMUA_Achr11P... | Banana | nucleus | 40.31 | 36.65 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 39.38 | 35.9 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 33.75 | 35.76 |
| GSMUA_Achr7P05980_001 | Banana | nucleus | 38.44 | 35.34 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 37.5 | 35.29 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 34.38 | 33.13 |
| GSMUA_Achr11P... | Banana | nucleus | 34.38 | 32.93 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 36.25 | 31.44 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | InterPro:BRN1/BRN2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr2G05640_001 | EnsemblPlants:GSMUA_Achr2P05640_001 | EnsemblPlants:GSMUA_Achr2T05640_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0S5F5 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF18 |
| SUPFAM:SSF101941 | UniParc:UPI000295865A | SEG:seg | : | : | : |
Description
Putative Protein BEARSKIN1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G05640_001]
Coordinates
chr2:-:10716650..10717821
Molecular Weight (calculated)
35766.0 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.655
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASSSSAS TGVPPGFRFH PTDEELLLYY LKKKVSLEKF ELEVVREVDL NKIEPWDLQG TCDRCNEWYF FSHKDRKYPT GSRTNRATGA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYRG RAPHGQKSDW IMHEYRLEDS DDAIDSAAGC EEGWVVCRVF KKKCFFKVGG DGSSGQAMEN HVNVGVSRQQ PRALSSQYVH
201: PNLTHHYHHF HHHNPNLYHS HMPANAYSHG QVQDLLTNHR PSGYDFAVLP GDAAAVVKPY DGGLELAAGP CEVMKDPGSS HWAVLEGMDG RLGGAAATAQ
301: QMNPMASQRG GEMDLWGYGK
101: CIRNSYKKIG MRKTLVFYRG RAPHGQKSDW IMHEYRLEDS DDAIDSAAGC EEGWVVCRVF KKKCFFKVGG DGSSGQAMEN HVNVGVSRQQ PRALSSQYVH
201: PNLTHHYHHF HHHNPNLYHS HMPANAYSHG QVQDLLTNHR PSGYDFAVLP GDAAAVVKPY DGGLELAAGP CEVMKDPGSS HWAVLEGMDG RLGGAAATAQ
301: QMNPMASQRG GEMDLWGYGK
001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
Arabidopsis Description
BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.