Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G309800.1 | Wheat | nucleus | 99.7 | 99.7 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 99.7 | 99.7 |
| Zm00001d003583_P001 | Maize | nucleus | 82.44 | 84.97 |
| EES12234 | Sorghum | nucleus | 85.42 | 83.43 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 60.12 | 63.32 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 57.44 | 60.31 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 32.74 | 55.28 |
| Solyc06g063430.1.1 | Tomato | nucleus | 50.3 | 53.14 |
| AT1G33280.1 | Thale cress | nucleus | 47.62 | 52.46 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 55.36 | 51.81 |
| CDX90756 | Canola | nucleus | 50.89 | 51.51 |
| Bra037914.1-P | Field mustard | nucleus | 52.38 | 51.46 |
| CDY05099 | Canola | nucleus | 50.89 | 51.35 |
| AT4G10350.1 | Thale cress | nucleus | 51.19 | 50.44 |
| Bra000709.1-P | Field mustard | nucleus | 50.89 | 50.15 |
| KRH23778 | Soybean | nucleus | 52.68 | 49.72 |
| KRH40024 | Soybean | nucleus | 52.38 | 49.03 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 27.68 | 46.04 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 33.63 | 40.36 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 38.39 | 38.05 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 33.33 | 36.72 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 34.52 | 36.36 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 38.1 | 36.36 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 32.14 | 36.24 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 39.29 | 35.87 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 35.71 | 35.71 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 35.71 | 35.71 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 32.74 | 35.26 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 41.07 | 34.67 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 41.37 | 34.66 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 41.96 | 34.31 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 37.2 | 34.06 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 32.74 | 33.95 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 39.29 | 33.93 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 40.18 | 33.83 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 40.77 | 33.83 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 41.67 | 33.73 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 41.07 | 33.66 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 40.48 | 33.33 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 38.99 | 33.25 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 40.48 | 33.17 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 40.48 | 33.09 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | InterPro:BRN1/BRN2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF18 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS2A01G311500 | EnsemblPlants:TraesCS2A01G311500.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:535240793..535242298
Molecular Weight (calculated)
37108.1 Da
IEP (calculated)
6.836
GRAVY (calculated)
-0.723
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MADFSSSNGV PPGFRFHPTD EELLLYYLKK KIGFEKFDLE VIREVDLNKI EPWDLQERCR IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD
101: KCIRTSYRKI GMRKTLVFYR GRAPHGQKSD WIMHEYRLEE IDEAQGGTSE DGWVVCRVFK KKCFFKIAGG GEGSSSQSAD AGGGHMAVSS PLGGHDHADR
201: AAMASHYMHG MHPQYHPQHA SSFYYSQMQP PEAAYSHHVQ VQDLLTNHRP AADAAGGGYD FSGLPVEHPG LDVGSSDGVA ADGLAEGRDQ TNGAADQQWQ
301: PMDGFSNGGG AAAVQQMSAM NSGQRGGEMD LWGYGR
101: KCIRTSYRKI GMRKTLVFYR GRAPHGQKSD WIMHEYRLEE IDEAQGGTSE DGWVVCRVFK KKCFFKIAGG GEGSSSQSAD AGGGHMAVSS PLGGHDHADR
201: AAMASHYMHG MHPQYHPQHA SSFYYSQMQP PEAAYSHHVQ VQDLLTNHRP AADAAGGGYD FSGLPVEHPG LDVGSSDGVA ADGLAEGRDQ TNGAADQQWQ
301: PMDGFSNGGG AAAVQQMSAM NSGQRGGEMD LWGYGR
001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K
Arabidopsis Description
BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.