Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G420200.1 | Wheat | nucleus | 89.59 | 86.52 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 87.56 | 84.15 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 85.28 | 83.79 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 41.62 | 82.41 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 80.96 | 82.01 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 85.28 | 81.75 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 81.22 | 80.4 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 82.23 | 80.4 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 50.76 | 78.43 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 80.46 | 78.27 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 77.41 | 76.44 |
| CDY72666 | Canola | nucleus | 30.2 | 73.01 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 74.62 | 71.53 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 74.87 | 71.08 |
| HORVU7Hr1G012760.6 | Barley | plastid | 78.43 | 67.47 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 73.86 | 64.96 |
| CDY35029 | Canola | cytosol | 32.23 | 61.06 |
| Os06t0131700-01 | Rice | nucleus | 59.9 | 59.75 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 55.08 | 59.13 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 60.15 | 55.37 |
| Solyc10g005010.2.1 | Tomato | nucleus | 40.1 | 55.05 |
| KRG97237 | Soybean | nucleus | 36.55 | 54.34 |
| KRG97235 | Soybean | nucleus | 36.55 | 54.34 |
| PGSC0003DMT400029321 | Potato | nucleus | 42.64 | 53.67 |
| Bra010183.1-P | Field mustard | nucleus | 40.1 | 51.3 |
| CDY26917 | Canola | nucleus | 40.1 | 51.3 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 39.85 | 48.76 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 39.85 | 48.76 |
| AT3G61910.1 | Thale cress | nucleus | 40.86 | 48.2 |
| CDX73267 | Canola | cytosol | 39.59 | 48.0 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 40.36 | 47.89 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 39.34 | 47.55 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 46.45 | 47.41 |
| CDY41554 | Canola | nucleus | 42.39 | 46.78 |
| Bra003478.1-P | Field mustard | nucleus | 39.85 | 46.73 |
| CDX67870 | Canola | nucleus | 39.85 | 46.73 |
| AT2G46770.1 | Thale cress | nucleus | 43.15 | 46.58 |
| PGSC0003DMT400014872 | Potato | nucleus | 41.12 | 46.55 |
| CDX80045 | Canola | nucleus | 42.39 | 46.52 |
| Bra004509.1-P | Field mustard | nucleus | 42.13 | 46.24 |
| Solyc08g008660.2.1 | Tomato | nucleus | 40.61 | 45.85 |
| CDY27524 | Canola | nucleus | 42.13 | 45.6 |
| Bra040486.1-P | Field mustard | nucleus | 42.13 | 45.6 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 23.35 | 45.54 |
| AT1G32770.1 | Thale cress | nucleus | 41.37 | 45.53 |
| PGSC0003DMT400031571 | Potato | nucleus | 42.64 | 45.41 |
| Bra023288.1-P | Field mustard | nucleus | 41.88 | 45.33 |
| CDX93819 | Canola | nucleus | 41.88 | 45.33 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 46.95 | 45.12 |
| CDY01243 | Canola | nucleus | 42.39 | 45.01 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 45.43 | 44.2 |
| Zm00001d045463_P001 | Maize | nucleus | 57.87 | 44.19 |
| KRH47818 | Soybean | nucleus | 44.16 | 43.5 |
| KRH06383 | Soybean | nucleus | 46.19 | 41.08 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 29.19 | 41.07 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 37.56 | 40.22 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 33.76 | 39.23 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 33.25 | 38.99 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 33.25 | 38.99 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 32.99 | 38.69 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 28.68 | 37.92 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 35.03 | 37.6 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 33.5 | 37.5 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 28.43 | 36.72 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 29.44 | 36.36 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 28.43 | 35.9 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 28.93 | 35.19 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4A01G420000 | EnsemblPlants:TraesCS4A01G420000.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:690879367..690881558
Molecular Weight (calculated)
42858.2 Da
IEP (calculated)
7.393
GRAVY (calculated)
-0.518
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MCISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDIDLNK LEPWDIQERC RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYSAAGS GRIGMRKTLV FYKGRAPRGH KSDWIMHEYR LDDAVPVNPT AGDATYNSSN SFPVRGVAGD QSPSAQEDGW VICRVFRKKN IVVQHQNGGG
201: AGAMEYSQSN CSSAVTAASD KAKAHMHQQQ HLPQSDDALD HILGYMGRSS TTSCKQETKP TNPSSSALDH LINSACNNGT GTLYDKLMKL PPLEHVVPGG
301: LLPPPNEYDR DWDALDRLAA YELNGLSNPA LAETTNGMSY IAHKLGGATS YSGGGTLHPP SFTGAGDGDL WSLARPVSSL HADLTMTWFN AVGC
101: DKAIYSAAGS GRIGMRKTLV FYKGRAPRGH KSDWIMHEYR LDDAVPVNPT AGDATYNSSN SFPVRGVAGD QSPSAQEDGW VICRVFRKKN IVVQHQNGGG
201: AGAMEYSQSN CSSAVTAASD KAKAHMHQQQ HLPQSDDALD HILGYMGRSS TTSCKQETKP TNPSSSALDH LINSACNNGT GTLYDKLMKL PPLEHVVPGG
301: LLPPPNEYDR DWDALDRLAA YELNGLSNPA LAETTNGMSY IAHKLGGATS YSGGGTLHPP SFTGAGDGDL WSLARPVSSL HADLTMTWFN AVGC
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.