Factsheet for VIT_15s0048g02660.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	13.73	84.13
TraesCS7A01G068200.1	Wheat	cytosol, nucleus, plastid	35.23	68.34
GSMUA_AchrUn_...	Banana	nucleus	43.52	65.88
Os08t0115800-01	Rice	nucleus	41.97	64.03
GSMUA_Achr9P24450_001	Banana	nucleus	54.66	60.11
VIT_02s0025g02710.t01	Wine grape	nucleus	62.95	60.0
GSMUA_Achr3P12230_001	Banana	nucleus	51.3	58.41
PGSC0003DMT400031571	Potato	nucleus	52.59	54.86
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	53.63	52.01
VIT_19s0085g01210.t01	Wine grape	nucleus	41.97	51.92
TraesCS7D01G314000.2	Wheat	nucleus	54.4	51.22
TraesCS7A01G317100.1	Wheat	nucleus	54.15	50.98
Zm00001d049678_P001	Maize	nucleus	49.74	50.66
Zm00001d035084_P001	Maize	nucleus	54.15	50.0
KXG24274	Sorghum	nucleus	54.15	49.88
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	47.41	49.86
Os06t0131700-01	Rice	nucleus	50.78	49.62
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	32.64	49.41
TraesCS7D01G062600.1	Wheat	cytosol, nucleus, plastid	49.22	48.1
TraesCS7A01G068300.1	Wheat	cytosol, nucleus, plastid	48.96	47.49
TraesCS7D01G062300.1	Wheat	cytosol, nucleus, plastid	50.52	47.45
TraesCS4A01G421100.1	Wheat	nucleus	48.19	46.62
TraesCS4A01G420000.1	Wheat	cytosol, nucleus, plastid	47.41	46.45
TraesCS4A01G421200.1	Wheat	nucleus	48.7	46.42
TraesCS7D01G063300.1	Wheat	cytosol, nucleus, plastid	48.45	46.4
EER87784	Sorghum	cytosol, nucleus, plastid	51.3	46.26
TraesCS7D01G062100.1	Wheat	cytosol, nucleus, plastid	48.96	46.1
TraesCS7A01G068000.1	Wheat	cytosol, nucleus, plastid	48.96	45.99
TraesCS4A01G421000.1	Wheat	nucleus	48.96	45.99
TraesCS4A01G420900.1	Wheat	cytosol, nucleus, plastid	47.67	45.89
TraesCS4A01G420200.1	Wheat	nucleus	48.45	45.83
TraesCS7D01G062400.1	Wheat	nucleus	47.93	45.79
TraesCS4A01G421300.1	Wheat	cytosol, nucleus, plastid	49.22	45.78
TraesCS4A01G420100.1	Wheat	nucleus	48.45	45.61
TraesCS4A01G419900.1	Wheat	nucleus	45.6	45.24
VIT_04s0023g03110.t01	Wine grape	nucleus	37.56	43.28
VIT_18s0089g01120.t01	Wine grape	nucleus	39.64	42.62
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	39.38	42.34
VIT_02s0154g00020.t01	Wine grape	nucleus	38.86	42.02
HORVU7Hr1G012780.1	Barley	nucleus	48.7	41.96
HORVU7Hr1G012760.6	Barley	plastid	48.7	41.05
VIT_18s0072g01060.t01	Wine grape	nucleus	33.16	40.89
Zm00001d045463_P001	Maize	nucleus	50.52	37.79

Protein Annotations

EntrezGene:100245500	wikigene:100245500	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CCB61294	ProteinID:CCB61294.1
UniProt:F6I2X7	EMBL:FN596739	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	EntrezGene:LOC100245500	wikigene:LOC100245500	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF45	SUPFAM:SSF101941	UniParc:UPI0002109EEA	ArrayExpress:VIT_15s0048g02660
EnsemblPlantsGene:VIT_15s0048g02660	EnsemblPlants:VIT_15s0048g02660.t01	RefSeq:XP_002267383	RefSeq:XP_002267383.1	SEG:seg	:

Description

No Description!

Coordinates

chr15:+:16791135..16792605

Molecular Weight (calculated)

44097.2 Da

IEP (calculated)

6.830

GRAVY (calculated)

-0.825

Length

386 amino acids

Sequence
(BLAST)

001: MSISVNGQSQ VPPGFRFHPT EEELLNYYLR KKVLYEKIDL DVIRDVDLNK LEPWDIQEKC RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKVIYSSFKR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD DNTNDTQVSN AVAEAQEEGW VVCRIFKKKN HHKTVESSSP MSSSSITAET RTQLLNSSDE
201: GALEQIFQHM GRTCKEDNNE ANNSRRFLRS IDTVINNGST LHDRFMKLPT LESPNSTSSQ NCYQPIHVQM IPENEAAPIT PHPVYHLDTG LNDDWAALDR
301: LVASHLNGQT DTSKQLACFN DPSMPFSSPT DHNDHDSQLL QPRSSSSTTR SYHPTQDYNT EIDLWSFTRS CLQSSDPLCH ISNTPS

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.