Factsheet for Zm00001d049678_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72666	Canola	nucleus	33.25	77.3
Os08t0115800-01	Rice	nucleus	50.92	76.28
Zm00001d035084_P001	Maize	nucleus	78.63	71.29
Zm00001d048456_P001	Maize	nucleus	27.18	70.55
CDY35029	Canola	cytosol	34.83	63.46
Zm00001d045600_P001	Maize	nucleus	22.96	62.59
Zm00001d051294_P001	Maize	cytosol	28.23	61.14
Solyc10g005010.2.1	Tomato	nucleus	43.54	57.49
KRG97235	Soybean	nucleus	38.26	54.72
PGSC0003DMT400029321	Potato	nucleus	45.12	54.63
Bra010183.1-P	Field mustard	nucleus	43.8	53.9
CDY26917	Canola	nucleus	43.8	53.9
KRG97237	Soybean	nucleus	37.47	53.58
Bra007640.1-P	Field mustard	cytosol, nucleus, plastid	44.06	51.86
CDY11382	Canola	cytosol, nucleus, plastid	44.06	51.86
CDX76597	Canola	cytosol, nucleus, peroxisome	45.12	51.51
CDY41554	Canola	nucleus	48.28	51.26
CDX80045	Canola	nucleus	48.55	51.25
Bra004509.1-P	Field mustard	nucleus	48.28	50.97
AT2G46770.1	Thale cress	nucleus	48.55	50.41
CDX73267	Canola	cytosol	43.01	50.15
VIT_15s0048g02660.t01	Wine grape	nucleus	50.66	49.74
CDY25087	Canola	cytosol, nucleus, peroxisome	42.74	49.69
Bra040486.1-P	Field mustard	nucleus	47.49	49.45
AT1G32770.1	Thale cress	nucleus	46.44	49.16
CDX67870	Canola	nucleus	43.27	48.81
Bra003478.1-P	Field mustard	nucleus	43.27	48.81
CDY27524	Canola	nucleus	46.7	48.63
AT3G61910.1	Thale cress	nucleus	42.22	47.9
CDX93819	Canola	nucleus	45.91	47.8
GSMUA_Achr7P05980_001	Banana	nucleus	43.8	47.7
Solyc08g008660.2.1	Tomato	nucleus	43.8	47.56
Bra023288.1-P	Field mustard	nucleus	45.65	47.53
CDY01243	Canola	nucleus	46.44	47.44
VIT_02s0025g02710.t01	Wine grape	nucleus	50.4	47.16
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	45.65	47.14
PGSC0003DMT400014872	Potato	nucleus	43.27	47.13
KRH47818	Soybean	nucleus	48.28	45.75
PGSC0003DMT400031571	Potato	nucleus	44.06	45.14
KRH06383	Soybean	nucleus	50.4	43.12
Zm00001d003583_P001	Maize	nucleus	36.41	42.33
Zm00001d017396_P001	Maize	nucleus	23.75	42.25
Zm00001d034984_P001	Maize	nucleus	30.34	41.52
Zm00001d002828_P001	Maize	cytosol	36.94	40.7
Zm00001d016119_P001	Maize	cytosol, nucleus, plastid	37.47	40.69
Zm00001d046126_P001	Maize	cytosol, nucleus, plastid	37.99	40.34
Zm00001d050039_P001	Maize	nucleus	30.61	39.32
Zm00001d025483_P001	Maize	nucleus	34.83	39.29
Zm00001d037029_P001	Maize	nucleus	37.2	38.52
Zm00001d002934_P001	Maize	nucleus	31.93	36.89
Zm00001d045463_P001	Maize	nucleus	48.55	35.66
Zm00001d027459_P001	Maize	nucleus	35.36	35.36

Protein Annotations

EntrezGene:100272652	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:AQK51050.1	UniProt:B4FPS5	EMBL:BT039113
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	EMBL:JN634078
EMBL:KJ727685	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF39	SUPFAM:SSF101941	UniParc:UPI00017B74BF	EnsemblPlantsGene:Zm00001d049678	EnsemblPlants:Zm00001d049678_P001	EnsemblPlants:Zm00001d049678_T001
SEG:seg	:	:	:	:	:

Description

NAC-transcription factor 115NAC domain-containing protein 43

Coordinates

chr4:-:39731374..39733815

Molecular Weight (calculated)

41288.5 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.537

Length

379 amino acids

Sequence
(BLAST)

001: MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVASQQIDL DVIRDVDLNK LEPWDIQERC KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYSAVRR MGMRKTLVFY RGRAPHGHKS DWIMHEYRLD DPDAAAVAAT VAAAAASSDG GQEDGWVVCR VFQKKHHHKE SSGRCRSKRG SKTEHGHGEA
201: KTAAHQRHGC GLQYSSNDDT LDHMLGRRSC KQEHELLPLP PPAAARAASR YIRPIETVLG GHGFMKLPPL ESPAAAEALT TPHAVSAGDA TAAGALDGLH
301: RAGNGITDWV MMDRMVALHL NGQAPAADQL GSCFDASADG GGLACFYSAA ANRLLGGGDD DLWSFTRSSS TERLGHVSL

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.