Factsheet for Zm00001d025483_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003583_P001	Maize	nucleus	86.9	89.57
EES12234	Sorghum	nucleus	90.77	88.66
Zm00001d048456_P001	Maize	nucleus	29.46	67.81
GSMUA_Achr6P28890_001	Banana	nucleus	60.71	63.95
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	57.74	60.62
Zm00001d051294_P001	Maize	cytosol	30.06	57.71
Zm00001d045600_P001	Maize	nucleus	23.51	56.83
Solyc06g063430.1.1	Tomato	nucleus	51.19	54.09
VIT_18s0089g01120.t01	Wine grape	nucleus	54.76	51.25
AT1G33280.1	Thale cress	nucleus	46.43	51.15
CDX90756	Canola	nucleus	50.3	50.9
Bra037914.1-P	Field mustard	nucleus	51.79	50.88
CDY05099	Canola	nucleus	50.3	50.75
AT4G10350.1	Thale cress	nucleus	50.89	50.15
Bra000709.1-P	Field mustard	nucleus	50.3	49.56
KRH23778	Soybean	nucleus	51.49	48.6
KRH40024	Soybean	nucleus	51.49	48.19
Zm00001d017396_P001	Maize	nucleus	26.49	41.78
Zm00001d034984_P001	Maize	nucleus	31.55	38.27
Zm00001d002828_P001	Maize	cytosol	38.69	37.79
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	40.18	36.78
Zm00001d016119_P001	Maize	cytosol, nucleus, plastid	38.1	36.68
Zm00001d050039_P001	Maize	nucleus	31.85	36.27
Zm00001d037029_P001	Maize	nucleus	39.29	36.07
Zm00001d046126_P001	Maize	cytosol, nucleus, plastid	38.1	35.85
Zm00001d049678_P001	Maize	nucleus	39.29	34.83
Zm00001d002934_P001	Maize	nucleus	31.85	32.62
Zm00001d035084_P001	Maize	nucleus	39.58	31.82
Zm00001d027459_P001	Maize	nucleus	35.71	31.66
Zm00001d045463_P001	Maize	nucleus	41.07	26.74

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1D6J7D7	ProteinID:AQK43836.1	InterPro:BRN1/BRN2	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF18	SUPFAM:SSF101941	UniParc:UPI00084570C4
EnsemblPlantsGene:Zm00001d025483	EnsemblPlants:Zm00001d025483_P001	EnsemblPlants:Zm00001d025483_T001	SEG:seg	:	:

Description

NAC-transcription factor 85Putative NAC domain transcription factor superfamily protein

Coordinates

chr10:-:120194130..120195766

Molecular Weight (calculated)

37092.9 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.790

Length

336 amino acids

Sequence
(BLAST)

001: MAAFSSSNGV PPGFRFHPTD EELLLYYLKK KVGFEKFELE VIREVDLNKI EPWELQETCR IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGLWKATGRD
101: KCIRTSYRKI GMRKTLVFYR GRAPHGQKTD WIMHEYRLED ADDDDAQGGT SEDGWVVCRV FKKKCFFKIG GGEGSTTSSQ GADAGGHLAT MSPPLGGHHD
201: LAYMHPHPYY HHAASYYSQM QAPGPHATAY SHHVQVQDLL TNHRPTDDDG AGTGYDFSGL PVENQPGGGL DVGSSDGVAT DDGGQLAGER RDQTTGTAAD
301: HQWQAMDGFS NGGSAEVQQM TGAQRGGEMD LWGYGR

Best Arabidopsis Sequence Match ( AT4G10350.1 )
(BLAST)

001: MGSSSNGGVP PGFRFHPTDE ELLHYYLKKK ISYQKFEMEV IREVDLNKLE PWDLQERCKI GSTPQNEWYF FSHKDRKYPT GSRTNRATHA GFWKATGRDK
101: CIRNSYKKIG MRKTLVFYKG RAPHGQKTDW IMHEYRLEDA DDPQANPSED GWVVCRVFMK KNLFKVVNEG SSSINSLDQH NHDASNNNHA LQARSFMHRD
201: SPYQLVRNHG AMTFELNKPD LALHQYPPIF HKPPSLGFDY SSGLARDSES AASEGLQYQQ ACEPGLDVGT CETVASHNHQ QGLGEWAMMD RLVTCHMGNE
301: DSSRGITYED GNNNSSSVVQ PVPATNQLTL RSEMDFWGYS K

Arabidopsis Description

BRN2Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.