Factsheet for GSMUA_Achr7P05980_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	13.51	74.6
GSMUA_AchrUn_...	Banana	nucleus	43.97	60.0
Os08t0115800-01	Rice	nucleus	42.24	58.1
GSMUA_Achr3P12230_001	Banana	nucleus	54.31	55.75
GSMUA_Achr2P20020_001	Banana	cytosol, nucleus, plastid	40.52	49.65
GSMUA_Achr9P24450_001	Banana	nucleus	48.56	48.15
GSMUA_Achr6P18860_001	Banana	cytosol, nucleus, plastid	35.06	47.47
GSMUA_Achr3P03500_001	Banana	nucleus	29.6	47.47
GSMUA_Achr10P...	Banana	nucleus	38.79	46.88
GSMUA_Achr10P...	Banana	nucleus	41.67	46.77
GSMUA_Achr7P23170_001	Banana	nucleus	32.18	44.98
GSMUA_Achr11P...	Banana	nucleus	40.23	44.16
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	50.29	43.97
Zm00001d049678_P001	Maize	nucleus	47.7	43.8
TraesCS7D01G314000.2	Wheat	nucleus	50.57	42.93
KXG24274	Sorghum	nucleus	51.44	42.72
TraesCS7A01G317100.1	Wheat	nucleus	50.29	42.68
Zm00001d035084_P001	Maize	nucleus	50.57	42.11
GSMUA_Achr3P22360_001	Banana	nucleus	36.49	42.05
GSMUA_Achr8P11590_001	Banana	cytosol	38.22	41.82
GSMUA_Achr11P...	Banana	nucleus	41.38	40.91
GSMUA_Achr6P28890_001	Banana	nucleus	37.36	40.75
GSMUA_Achr11P...	Banana	nucleus	37.36	38.92
GSMUA_Achr7P06640_001	Banana	nucleus	37.64	38.53
GSMUA_Achr2P05640_001	Banana	cytosol, nucleus, plastid	35.34	38.44
GSMUA_Achr8P12100_001	Banana	nucleus	36.49	38.25
GSMUA_Achr6P36840_001	Banana	nucleus	38.51	36.31

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G05980_001
EnsemblPlants:GSMUA_Achr7P05980_001	EnsemblPlants:GSMUA_Achr7T05980_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TF38	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF45	SUPFAM:SSF101941
UniParc:UPI000294E2B1	SEG:seg	:	:	:	:

Description

NAC domain-containing protein 43 [Source:GMGC_GENE;Acc:GSMUA_Achr7G05980_001]

Coordinates

chr7:+:4427852..4429061

Molecular Weight (calculated)

38990.7 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.702

Length

348 amino acids

Sequence
(BLAST)

001: MSVNGRPRVP PGFRFHPTEE ELLCYYLRKK VTSEEIELDV IRDVDLNKLE PWDIQEKCGV NGAAQQSEWY FFSHKDRKYP TGTRTNRATA AGFWKATGRD
101: KVIYSNARRI GMRKTLVFYK GRAPRGQKLD WIMHEYRLDD HSHLIPRSDM CAAVSMGEAT NQEDGWVVCR VFKQKNYHHH KAIDDSKSSV KTQLLRPGGG
201: DDALDQILQY MSRSYTRESQ GTSDNAADRA SNLRPIETVF GCGLQEMFMK LPPLDSPTTL GSPPRNLPPD RSSDDHASHR SPAAIHAGVG DWAAFDQLLA
301: SQLGGPRHPS PSSATPHADD YRHGGDGDLW SLTAAASPLF DRISPVSL

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.