Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70728 | Canola | nucleus | 49.65 | 78.77 |
| GSMUA_Achr10P... | Banana | nucleus | 82.75 | 75.81 |
| Os06t0530400-01 | Rice | cytosol, nucleus, peroxisome | 47.54 | 66.83 |
| VIT_19s0085g01210.t01 | Wine grape | nucleus | 71.48 | 65.06 |
| KRH13825 | Soybean | cytosol, nucleus, peroxisome | 70.07 | 61.04 |
| KRH43624 | Soybean | cytosol, nucleus, peroxisome | 70.42 | 60.98 |
| GSMUA_Achr10P... | Banana | nucleus | 59.51 | 58.68 |
| PGSC0003DMT400025026 | Potato | nucleus | 65.14 | 57.1 |
| Solyc12g017400.1.1 | Tomato | nucleus | 63.38 | 56.43 |
| GSMUA_Achr3P03500_001 | Banana | nucleus | 41.2 | 53.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.54 | 52.94 |
| KXG20105 | Sorghum | cytosol, nucleus, plastid | 65.85 | 52.68 |
| CDY71976 | Canola | nucleus | 64.08 | 52.15 |
| Bra008423.1-P | Field mustard | nucleus | 63.73 | 51.86 |
| TraesCS7D01G329200.1 | Wheat | nucleus | 66.9 | 51.63 |
| Bra035127.1-P | Field mustard | nucleus | 65.14 | 51.53 |
| CDX87372 | Canola | nucleus | 64.79 | 51.11 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 66.2 | 51.09 |
| HORVU7Hr1G079500.1 | Barley | nucleus | 66.55 | 51.08 |
| CDY22285 | Canola | nucleus | 62.32 | 51.01 |
| CDY70056 | Canola | nucleus | 64.08 | 50.98 |
| TraesCS7B01G233300.1 | Wheat | nucleus | 66.55 | 50.81 |
| Zm00001d046126_P001 | Maize | cytosol, nucleus, plastid | 63.73 | 50.7 |
| Bra003602.1-P | Field mustard | nucleus | 63.73 | 50.7 |
| CDX88550 | Canola | nucleus | 64.79 | 50.69 |
| Os02t0252200-01 | Rice | nucleus | 63.73 | 50.42 |
| AT1G79580.4 | Thale cress | nucleus | 64.79 | 49.6 |
| Zm00001d037029_P001 | Maize | nucleus | 63.73 | 49.45 |
| EES04857 | Sorghum | nucleus | 58.8 | 48.55 |
| Zm00001d016119_P001 | Maize | cytosol, nucleus, plastid | 59.15 | 48.14 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 40.49 | 44.75 |
| GSMUA_Achr3P12230_001 | Banana | nucleus | 52.11 | 43.66 |
| GSMUA_Achr7P05980_001 | Banana | nucleus | 49.65 | 40.52 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 50.0 | 40.46 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 45.07 | 40.25 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 34.86 | 39.76 |
| OQU76499 | Sorghum | nucleus | 39.79 | 39.51 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 44.37 | 39.5 |
| GSMUA_Achr11P... | Banana | nucleus | 44.01 | 39.43 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 46.48 | 38.82 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 45.07 | 38.55 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 43.31 | 38.44 |
| GSMUA_Achr11P... | Banana | nucleus | 47.54 | 38.35 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 40.49 | 38.08 |
| GSMUA_Achr11P... | Banana | nucleus | 44.37 | 37.72 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 44.01 | 33.88 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0048829 | EnsemblPlantsGene:GSMUA_Achr2G20020_001 | EnsemblPlants:GSMUA_Achr2P20020_001 | EnsemblPlants:GSMUA_Achr2T20020_001 | InterPro:IPR003441 | InterPro:IPR036093 |
| UniProt:M0S9J3 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF16 | InterPro:SMB | SUPFAM:SSF101941 | UniParc:UPI0002969FF4 | SEG:seg | : |
Description
NAC domain-containing protein 76 [Source:GMGC_GENE;Acc:GSMUA_Achr2G20020_001]
Coordinates
chr2:-:19959636..19960801
Molecular Weight (calculated)
32608.9 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.585
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDVCFALAS MMPSNGQLSI PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIRDVDINKL EPWDLKEKCR IGSGPQNEWY FFSHKDKKYP TGTRTNRATT
101: AGFWKATGRD KAIHLSSSKR IGMRKTLVFY TGRAPHGQKT DWIMHEYRLE DRNPDIQEDG WVVCRVFKKK NYQRGIPPEA VMEEDHSEAT ISPFVPPLSI
201: NSLDLECSQN LMKLTTGGGA LLPQDRFPGD WSILDKLLAS HQDLDQLFQS KCNPPSQLLD MATSVHRNPF QYLGCEADLL KFSN
101: AGFWKATGRD KAIHLSSSKR IGMRKTLVFY TGRAPHGQKT DWIMHEYRLE DRNPDIQEDG WVVCRVFKKK NYQRGIPPEA VMEEDHSEAT ISPFVPPLSI
201: NSLDLECSQN LMKLTTGGGA LLPQDRFPGD WSILDKLLAS HQDLDQLFQS KCNPPSQLLD MATSVHRNPF QYLGCEADLL KFSN
001: MEIGSSSTVA GGGQLSVPPG FRFHPTEEEL LYYYLKKKVS YEPIDLDVIR EVDLNKLEPW ELKEKCRIGS GPQNEWYFFS HKDKKYPTGT RTNRATAAGF
101: WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI
201: DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD
301: KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP VNQRFPFHYL GNDANLLKFP K
101: WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI
201: DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD
301: KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP VNQRFPFHYL GNDANLLKFP K
Arabidopsis Description
SMBProtein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.