Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 62.54 | 83.14 |
| CDY72666 | Canola | nucleus | 38.05 | 79.14 |
| CDY35029 | Canola | cytosol | 40.41 | 65.87 |
| Solyc10g005010.2.1 | Tomato | nucleus | 51.33 | 60.63 |
| KRG97235 | Soybean | nucleus | 46.31 | 59.25 |
| KRG97237 | Soybean | nucleus | 45.43 | 58.11 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 58.11 | 56.13 |
| GSMUA_Achr7P05980_001 | Banana | nucleus | 55.75 | 54.31 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 51.33 | 54.04 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 51.33 | 54.04 |
| CDY26917 | Canola | nucleus | 48.97 | 53.9 |
| Bra010183.1-P | Field mustard | nucleus | 48.97 | 53.9 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 51.62 | 52.71 |
| CDY41554 | Canola | nucleus | 55.16 | 52.38 |
| CDX80045 | Canola | nucleus | 55.46 | 52.37 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 50.15 | 52.15 |
| GSMUA_Achr2P20020_001 | Banana | cytosol, nucleus, plastid | 43.66 | 52.11 |
| Bra004509.1-P | Field mustard | nucleus | 55.16 | 52.09 |
| AT3G61910.1 | Thale cress | nucleus | 50.74 | 51.5 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 58.41 | 51.3 |
| AT2G46770.1 | Thale cress | nucleus | 55.16 | 51.23 |
| Bra003478.1-P | Field mustard | nucleus | 50.74 | 51.19 |
| CDX67870 | Canola | nucleus | 50.74 | 51.19 |
| Bra040486.1-P | Field mustard | nucleus | 54.57 | 50.82 |
| CDX73267 | Canola | cytosol | 48.67 | 50.77 |
| CDY27524 | Canola | nucleus | 53.69 | 50.0 |
| GSMUA_Achr3P03500_001 | Banana | nucleus | 31.86 | 49.77 |
| AT1G32770.1 | Thale cress | nucleus | 51.92 | 49.16 |
| PGSC0003DMT400031571 | Potato | nucleus | 53.1 | 48.65 |
| GSMUA_Achr10P... | Banana | nucleus | 41.3 | 48.61 |
| Solyc08g008660.2.1 | Tomato | nucleus | 49.56 | 48.14 |
| GSMUA_Achr10P... | Banana | nucleus | 43.95 | 48.06 |
| CDX93819 | Canola | nucleus | 51.33 | 47.8 |
| Bra023288.1-P | Field mustard | nucleus | 51.03 | 47.53 |
| CDY01243 | Canola | nucleus | 51.92 | 47.44 |
| KRH47818 | Soybean | nucleus | 55.16 | 46.75 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 34.51 | 45.53 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 42.18 | 44.97 |
| KRH06383 | Soybean | nucleus | 57.82 | 44.24 |
| GSMUA_Achr11P... | Banana | nucleus | 41.3 | 44.16 |
| GSMUA_Achr6P28890_001 | Banana | nucleus | 40.41 | 42.95 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 31.27 | 42.57 |
| GSMUA_Achr11P... | Banana | nucleus | 43.66 | 42.05 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 36.58 | 41.06 |
| GSMUA_Achr11P... | Banana | nucleus | 40.12 | 40.72 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 39.53 | 40.36 |
| GSMUA_Achr2P05640_001 | Banana | cytosol, nucleus, plastid | 38.05 | 40.31 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 40.41 | 40.29 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 40.41 | 37.13 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G12230_001 |
| EnsemblPlants:GSMUA_Achr3P12230_001 | EnsemblPlants:GSMUA_Achr3T12230_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SDZ0 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF45 | SUPFAM:SSF101941 |
| UniParc:UPI00029640CB | SEG:seg | : | : | : | : |
Description
NAC domain-containing protein 43 [Source:GMGC_GENE;Acc:GSMUA_Achr3G12230_001]
Coordinates
chr3:-:9073805..9075183
Molecular Weight (calculated)
37879.4 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.726
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKVIYSSVKR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD DHSDLLSQSN VRTCTRMHRY AMGEATNQED GWVVCRVFKK KNHHKSIGSP NNSCSVTSDA
201: KTQLLHHPGS GDDALDQILQ YMGRSCKRES HGTSINDEMF MKLPGLQSPS VPSGNGYCAD PAVGDWAAFD RLLASQLNGP FEEPKPLPCC DDPCFTFHSS
301: AGYHHGGGGG SGSGSGDGDL WSMTRTTSSQ SDRISHVSM
101: DKVIYSSVKR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD DHSDLLSQSN VRTCTRMHRY AMGEATNQED GWVVCRVFKK KNHHKSIGSP NNSCSVTSDA
201: KTQLLHHPGS GDDALDQILQ YMGRSCKRES HGTSINDEMF MKLPGLQSPS VPSGNGYCAD PAVGDWAAFD RLLASQLNGP FEEPKPLPCC DDPCFTFHSS
301: AGYHHGGGGG SGSGSGDGDL WSMTRTTSSQ SDRISHVSM
001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG
Arabidopsis Description
NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.