Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93819 | Canola | nucleus | 95.96 | 97.8 |
| CDY26917 | Canola | nucleus | 74.39 | 89.61 |
| AT1G32770.1 | Thale cress | nucleus | 84.1 | 87.15 |
| CDX73267 | Canola | cytosol | 71.7 | 81.85 |
| HORVU7Hr1G012740.1 | Barley | cytosol, nucleus, plastid | 13.75 | 80.95 |
| CDY72666 | Canola | nucleus | 34.23 | 77.91 |
| CDY70728 | Canola | nucleus | 32.34 | 67.04 |
| CDY35029 | Canola | cytosol | 37.47 | 66.83 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 27.76 | 64.78 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 34.5 | 64.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.16 | 58.43 |
| Os08t0115800-01 | Rice | nucleus | 38.81 | 56.92 |
| GSMUA_Achr3P12230_001 | Banana | nucleus | 47.44 | 51.92 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 44.74 | 51.55 |
| CDX80045 | Canola | nucleus | 49.6 | 51.25 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 45.82 | 51.2 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 55.8 | 51.11 |
| CDY41554 | Canola | nucleus | 49.06 | 50.98 |
| CDY27524 | Canola | nucleus | 49.87 | 50.82 |
| CDY62781 | Canola | nucleus | 21.56 | 50.63 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 44.2 | 50.31 |
| CDX67870 | Canola | nucleus | 45.01 | 49.7 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 33.96 | 49.41 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 46.09 | 48.72 |
| Zm00001d049678_P001 | Maize | nucleus | 47.44 | 46.44 |
| HORVU7Hr1G075550.1 | Barley | cytosol, nucleus, plastid | 47.44 | 44.22 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 43.67 | 44.14 |
| TraesCS7D01G314000.2 | Wheat | nucleus | 48.25 | 43.66 |
| Os06t0131700-01 | Rice | nucleus | 46.36 | 43.54 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 47.98 | 43.41 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 45.82 | 43.04 |
| KXG24274 | Sorghum | nucleus | 48.52 | 42.96 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 45.82 | 42.71 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 44.47 | 42.42 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 45.01 | 42.39 |
| Zm00001d035084_P001 | Maize | nucleus | 47.71 | 42.34 |
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 46.63 | 42.2 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 46.36 | 42.16 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 45.55 | 42.14 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 45.28 | 42.11 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 46.63 | 42.09 |
| CDY30778 | Canola | nucleus | 33.42 | 42.03 |
| TraesCS7D01G062300.1 | Wheat | cytosol, nucleus, plastid | 46.36 | 41.85 |
| CDY45221 | Canola | nucleus | 33.15 | 41.84 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 45.55 | 41.83 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 45.28 | 41.48 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 46.36 | 41.45 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 45.82 | 41.36 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 45.55 | 41.22 |
| CDY00280 | Canola | nucleus | 28.84 | 41.15 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 44.47 | 40.94 |
| CDY22285 | Canola | nucleus | 38.01 | 40.63 |
| CDY05099 | Canola | nucleus | 36.39 | 40.54 |
| CDX90756 | Canola | nucleus | 36.12 | 40.36 |
| CDX98078 | Canola | nucleus | 36.39 | 39.94 |
| CDY71976 | Canola | nucleus | 37.2 | 39.54 |
| CDX87372 | Canola | nucleus | 38.27 | 39.44 |
| CDY21041 | Canola | nucleus | 37.47 | 39.38 |
| CDY15987 | Canola | nucleus | 35.85 | 39.23 |
| CDY70056 | Canola | nucleus | 37.74 | 39.22 |
| CDX88550 | Canola | nucleus | 38.27 | 39.12 |
| CDY26551 | Canola | nucleus | 35.85 | 39.12 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 45.01 | 39.02 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 46.09 | 38.17 |
| CDY31249 | Canola | nucleus | 37.47 | 38.08 |
| CDY31835 | Canola | nucleus | 36.93 | 37.95 |
| CDY46914 | Canola | nucleus | 36.93 | 37.95 |
| CDY47055 | Canola | nucleus | 33.42 | 37.92 |
| CDX69208 | Canola | nucleus | 34.77 | 37.61 |
| CDX72846 | Canola | nucleus | 32.88 | 37.54 |
| CDX96362 | Canola | nucleus | 32.88 | 37.54 |
| CDY38177 | Canola | nucleus | 36.39 | 37.4 |
| CDX75558 | Canola | nucleus | 34.5 | 37.32 |
| CDX82202 | Canola | nucleus | 32.34 | 36.7 |
| CDY03671 | Canola | nucleus | 32.34 | 36.7 |
| CDX72580 | Canola | nucleus | 33.42 | 36.58 |
| HORVU7Hr1G012760.6 | Barley | plastid | 44.74 | 36.24 |
| CDY30057 | Canola | nucleus | 38.27 | 36.04 |
| CDX87246 | Canola | nucleus | 32.34 | 35.71 |
| CDY16776 | Canola | nucleus | 31.81 | 35.54 |
| CDY58006 | Canola | nucleus | 32.34 | 34.48 |
| CDY30716 | Canola | nucleus | 32.34 | 33.24 |
| Zm00001d045463_P001 | Maize | nucleus | 45.55 | 32.75 |
| CDY00281 | Canola | cytosol | 2.16 | 11.94 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078ENZ6 | EnsemblPlants:CDY01243 | ProteinID:CDY01243 | ProteinID:CDY01243.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00111390001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF45 | SUPFAM:SSF101941 | UniParc:UPI0004EE0FBB | SEG:seg | : | : |
Description
BnaC05g24890D
Coordinates
chrLK031925:+:537727..539558
Molecular Weight (calculated)
42999.2 Da
IEP (calculated)
6.023
GRAVY (calculated)
-0.834
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLPSSMAE SKVNLSINGQ SKVPPGFRFH PTEEELLHYY LRKKVHSQKI DLDVIREVDL NKLEPWDIQE ECRIGSTPQN DWYFFSHKDK KYPTGTRTNR
101: ATVSGFWKAT GRDKIIYSCV RRIGLRKTLV FYKGRAPHGQ KSDWIMHEYR LDETPTTNEY SDVVSEDPMS YNEEGWVVCR VFRKKNYQKI DDSPKITLSS
201: SPGDTEEKKR STTSHNTQNG NVLDHVLLYM DRSCPNICMP ELQTTIQRQH NQDDILFMQL PSLETPKSED LVDQSLNIPN QLDSSLVQEK KNGRPVCSNW
301: ASLDRLVAWQ LNNGHHKCDR ASFDEEEEDG DTMMQRWDLH WSNDDHVDLW SSFTESSSSP SSLDPLLHLS V
101: ATVSGFWKAT GRDKIIYSCV RRIGLRKTLV FYKGRAPHGQ KSDWIMHEYR LDETPTTNEY SDVVSEDPMS YNEEGWVVCR VFRKKNYQKI DDSPKITLSS
201: SPGDTEEKKR STTSHNTQNG NVLDHVLLYM DRSCPNICMP ELQTTIQRQH NQDDILFMQL PSLETPKSED LVDQSLNIPN QLDSSLVQEK KNGRPVCSNW
301: ASLDRLVAWQ LNNGHHKCDR ASFDEEEEDG DTMMQRWDLH WSNDDHVDLW SSFTESSSSP SSLDPLLHLS V
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.